Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AP000473.2-201ENST00000602659 1537 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC073136.1-201ENST00000449426 2884 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS1Q01581 TRIM51GP-201ENST00000534741 1350 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 SMG1P7-201ENST00000565246 2704 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS1Q01581 RN7SKP269-201ENST00000365545 319 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 NPM1P37-201ENST00000403105 874 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 COX5BP7-201ENST00000414780 274 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 RANP7-201ENST00000418085 644 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 MGAT2P2-201ENST00000427194 797 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC245028.2-201ENST00000458673 253 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AL049874.2-201ENST00000492636 288 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AL136038.1-201ENST00000497246 351 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 MYL12BP2-201ENST00000503948 512 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC106872.4-201ENST00000510050 523 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC100784.1-201ENST00000522790 310 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AL359219.2-201ENST00000555184 348 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 MIR4660-201ENST00000583549 74 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC010503.3-201ENST00000594355 540 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 FAM72A-208ENST00000607379 1139 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 AC132825.8-201ENST00000640783 297 ntBASIC5.08□□□□□ -1.6
HMGCS1Q01581 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS1Q01581 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS1Q01581 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS1Q01581 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS1Q01581 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGCS1Q01581 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC023421.1-201ENST00000590535 1785 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 RNA5SP335-201ENST00000363817 110 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 MIR143-201ENST00000385300 106 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 RPL21P67-201ENST00000402896 478 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 AL121776.1-201ENST00000429337 372 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 PPIAP20-201ENST00000449839 135 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 GAPDHP14-201ENST00000450472 937 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 NIFKP7-201ENST00000503365 834 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 SUMO2P4-201ENST00000504193 276 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC040958.1-201ENST00000561102 201 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC005252.1-201ENST00000604518 1063 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC010245.2-201ENST00000606908 1167 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 AC027279.1-201ENST00000568885 4284 ntBASIC5.07□□□□□ -1.6
HMGCS1Q01581 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HMGCS1Q01581 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS1Q01581 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS1Q01581 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms