Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NR1H5P-201ENST00000452683 1377 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 XKRY2-202ENST00000623874 1581 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 XKRY-202ENST00000624960 1581 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AC097063.1-201ENST00000426714 1797 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 SNORA70.6-201ENST00000383934 134 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 RNU1-77P-201ENST00000390868 162 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 SNORA48.4-201ENST00000391089 134 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
H3F3AP84243 GPS2P1-201ENST00000411761 986 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 NPM1P4-201ENST00000414095 812 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
H3F3AP84243 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.78□□□□□ -1.64
H3F3AP84243 RPL7AP49-201ENST00000429522 581 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 CFL1P1-202ENST00000432948 411 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AL591438.1-201ENST00000433508 581 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 PPIAP20-201ENST00000449839 135 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 DNAJB5P1-201ENST00000454004 806 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AC079168.1-201ENST00000458741 345 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AC090589.1-201ENST00000473109 362 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 RN7SL423P-201ENST00000486202 304 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 COX6B1P2-201ENST00000489624 230 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.78□□□□□ -1.64
H3F3AP84243 RNA5SP373-201ENST00000517271 95 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.78□□□□□ -1.64
H3F3AP84243 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.78□□□□□ -1.64
H3F3AP84243 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.78□□□□□ -1.64
H3F3AP84243 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
H3F3AP84243 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.78□□□□□ -1.64
H3F3AP84243 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.78□□□□□ -1.64
H3F3AP84243 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.78□□□□□ -1.64
H3F3AP84243 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.78□□□□□ -1.64
H3F3AP84243 RBM22P1-201ENST00000578589 1214 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 FKBP1AP1-201ENST00000594588 318 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 AC136428.4-201ENST00000634254 1155 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 AC074101.1-201ENST00000637861 241 ntBASIC4.78□□□□□ -1.64
H3F3AP84243 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
H3F3AP84243 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
H3F3AP84243 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3F3AP84243 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.78□□□□□ -1.64
H3F3AP84243 AL034549.2-201ENST00000618285 3373 ntBASIC4.78□□□□□ -1.65
H3F3AP84243 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
H3F3AP84243 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
H3F3AP84243 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
H3F3AP84243 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 U3.7-201ENST00000363668 216 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 RNU1-146P-201ENST00000364015 165 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 RN7SKP269-201ENST00000365545 319 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC092642.1-201ENST00000392417 425 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AL391361.1-201ENST00000405580 489 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.77□□□□□ -1.65
H3F3AP84243 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.77□□□□□ -1.65
H3F3AP84243 AC093655.2-201ENST00000425735 631 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 CYCSP6-201ENST00000434498 302 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.77□□□□□ -1.65
H3F3AP84243 AC090804.1-201ENST00000448870 490 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.77□□□□□ -1.65
H3F3AP84243 CBX1P5-201ENST00000475330 559 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.77□□□□□ -1.65
H3F3AP84243 PGAM1P13-201ENST00000507497 754 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC021193.1-201ENST00000511607 420 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.77□□□□□ -1.65
H3F3AP84243 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
H3F3AP84243 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.77□□□□□ -1.65
H3F3AP84243 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.77□□□□□ -1.65
H3F3AP84243 OR8A2P-201ENST00000528631 952 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.77□□□□□ -1.65
H3F3AP84243 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
H3F3AP84243 IMMP1LP3-201ENST00000604197 224 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC009027.1-201ENST00000604510 479 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC005252.1-201ENST00000604518 1063 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 Z95327.3-201ENST00000610385 572 ntBASIC4.77□□□□□ -1.65
H3F3AP84243 AC022467.1-201ENST00000614738 749 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms