Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SEC11B-201ENST00000518383 499 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.89□□□□□ -1.47
HDAC4P56524 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.89□□□□□ -1.47
HDAC4P56524 AC079600.1-201ENST00000550326 297 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.89□□□□□ -1.47
HDAC4P56524 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.89□□□□□ -1.47
HDAC4P56524 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.89□□□□□ -1.47
HDAC4P56524 AL159169.2-201ENST00000610061 1269 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 MIR6798-201ENST00000612887 67 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 AC015712.7-201ENST00000615211 635 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 AL138960.2-201ENST00000625145 535 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.89□□□□□ -1.47
HDAC4P56524 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 AC068870.1-201ENST00000563737 2455 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HDAC4P56524 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HDAC4P56524 AC009962.1-201ENST00000567327 3813 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 SRRM1P3-201ENST00000426911 2678 ntBASIC5.89□□□□□ -1.47
HDAC4P56524 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.89□□□□□ -1.47
HDAC4P56524 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 OR13C1P-202ENST00000641378 2919 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 KARSP1-201ENST00000451871 1752 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 MIR365B-201ENST00000362317 111 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 Y_RNA.110-201ENST00000363220 99 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 RNA5SP131-201ENST00000365452 119 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 RN7SKP292-201ENST00000365522 317 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 OR13C3-201ENST00000374781 1108 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 OR10T1P-201ENST00000424327 947 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 FAR1P1-201ENST00000427163 934 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 HMGN2P27-201ENST00000427352 270 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 BX276092.6-201ENST00000430476 250 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 SUMO2P3-201ENST00000438311 288 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 AC073109.1-201ENST00000445066 978 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 BX276092.8-201ENST00000455722 250 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 AC091544.1-201ENST00000484702 348 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.88□□□□□ -1.47
HDAC4P56524 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC4P56524 RN7SL101P-201ENST00000496350 279 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 RPS17P5-201ENST00000498293 408 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 SNORD46.2-201ENST00000516021 102 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 RN7SKP34-201ENST00000516142 244 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 RN7SKP253-201ENST00000516424 309 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 AC068993.1-201ENST00000546724 589 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC4P56524 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC4P56524 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC4P56524 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.88□□□□□ -1.47
HDAC4P56524 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.88□□□□□ -1.47
HDAC4P56524 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.88□□□□□ -1.47
HDAC4P56524 MIR6886-201ENST00000619864 61 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HDAC4P56524 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HDAC4P56524 MIR193BHG-214ENST00000641765 509 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 MTCO1P11-201ENST00000429111 1528 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 OR10AB1P-202ENST00000641219 1686 ntBASIC5.88□□□□□ -1.47
HDAC4P56524 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HDAC4P56524 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HDAC4P56524 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC4P56524 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC4P56524 AL031595.2-201ENST00000624215 19071 ntBASIC5.87□□□□□ -1.47
HDAC4P56524 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC4P56524 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDAC4P56524 AL121886.1-201ENST00000358609 435 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms