Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCS2P54868 AC132825.1-201ENST00000463573 2247 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCS2P54868 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HMGCS2P54868 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
HMGCS2P54868 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS2P54868 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGCS2P54868 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS2P54868 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
HMGCS2P54868 AL034549.2-201ENST00000618285 3373 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS2P54868 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGCS2P54868 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS2P54868 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS2P54868 GAPDHP15-201ENST00000398586 975 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS2P54868 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGCS2P54868 PSAT1P4-201ENST00000466500 526 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 RN7SL205P-201ENST00000490174 284 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 AC008897.1-201ENST00000494006 347 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 OR7H2P-201ENST00000513483 306 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 OR4A43P-201ENST00000532938 908 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS2P54868 AC084824.2-201ENST00000548906 345 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 AC063949.1-201ENST00000552900 865 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGCS2P54868 AC009117.1-201ENST00000563948 554 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 RN7SL52P-201ENST00000584271 284 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS2P54868 AL022394.1-201ENST00000606979 292 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 RN7SL722P-201ENST00000617780 284 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 RN7SL565P-201ENST00000618246 284 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 AC006206.1-201ENST00000544842 3387 ntBASIC6.05□□□□□ -1.44
HMGCS2P54868 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HMGCS2P54868 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HMGCS2P54868 AC007996.1-201ENST00000620414 2821 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 AC100757.1-201ENST00000616872 1835 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMGCS2P54868 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HMGCS2P54868 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMGCS2P54868 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGCS2P54868 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 RNU6-673P-201ENST00000365084 104 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 RN7SKP114-201ENST00000410327 279 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 AC016397.1-201ENST00000412463 242 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS2P54868 NPM1P25-201ENST00000429734 854 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGCS2P54868 KNOP1P3-201ENST00000446933 426 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 TPT1P13-201ENST00000449760 499 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS2P54868 AC140172.1-201ENST00000502928 141 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS2P54868 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS2P54868 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS2P54868 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS2P54868 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS2P54868 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
HMGCS2P54868 AC008814.1-201ENST00000603797 406 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS2P54868 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.04□□□□□ -1.44
HMGCS2P54868 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGCS2P54868 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HMGCS2P54868 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
HMGCS2P54868 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS2P54868 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 KYNUP3-201ENST00000574386 1341 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS2P54868 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS2P54868 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS2P54868 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HMGCS2P54868 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HMGCS2P54868 U3.10-201ENST00000364459 214 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 RNA5SP428-201ENST00000365129 132 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS2P54868 U3.28-201ENST00000391249 210 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HMGCS2P54868 OR8V1P-201ENST00000395193 873 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 AC013442.1-201ENST00000397347 228 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HMGCS2P54868 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS2P54868 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS2P54868 PRPF38AP2-201ENST00000438179 851 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 CEACAMP10-202ENST00000495431 496 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms