Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.94□□□□□ -1.46
CLCN3P51790 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.94□□□□□ -1.46
CLCN3P51790 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 OR11H3P-201ENST00000554547 982 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLCN3P51790 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.94□□□□□ -1.46
CLCN3P51790 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.94□□□□□ -1.46
CLCN3P51790 AC135068.5-201ENST00000624197 983 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 AC074101.1-201ENST00000637861 241 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.94□□□□□ -1.46
CLCN3P51790 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 NAMPTP1-201ENST00000440465 2514 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 AC007938.2-201ENST00000604666 2634 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 AC093297.3-201ENST00000607056 2517 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CLCN3P51790 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLCN3P51790 AL645927.1-201ENST00000396783 406 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.93□□□□□ -1.46
CLCN3P51790 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 AC021876.1-201ENST00000425959 359 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 LINC02210-201ENST00000444561 288 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.93□□□□□ -1.46
CLCN3P51790 RN7SL610P-201ENST00000463845 291 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 RN7SL188P-201ENST00000469842 285 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.93□□□□□ -1.46
CLCN3P51790 AC021106.1-201ENST00000509020 1058 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.93□□□□□ -1.46
CLCN3P51790 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.93□□□□□ -1.46
CLCN3P51790 AC084824.2-201ENST00000548906 345 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 HMGN2P6-201ENST00000551091 273 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.93□□□□□ -1.46
CLCN3P51790 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.93□□□□□ -1.46
CLCN3P51790 OOSP1P2-201ENST00000579644 351 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.93□□□□□ -1.46
CLCN3P51790 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.93□□□□□ -1.46
CLCN3P51790 AC009237.13-201ENST00000603193 276 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.93□□□□□ -1.46
CLCN3P51790 AC037198.3-201ENST00000616754 526 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLCN3P51790 CR382285.2-201ENST00000624662 1495 ntBASIC5.93□□□□□ -1.46
CLCN3P51790 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.93□□□□□ -1.46
CLCN3P51790 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CLCN3P51790 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.93□□□□□ -1.46
CLCN3P51790 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.93□□□□□ -1.46
CLCN3P51790 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLCN3P51790 OR51C1P-202ENST00000641159 1444 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 AC090220.1-201ENST00000593078 1699 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 BCORP1-203ENST00000513194 5093 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLCN3P51790 RNU6-1331P-201ENST00000363658 106 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLCN3P51790 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLCN3P51790 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLCN3P51790 MIR105-1-201ENST00000385222 81 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 MIR765-201ENST00000390226 114 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLCN3P51790 DBIP1-201ENST00000401435 260 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.92□□□□□ -1.46
CLCN3P51790 RN7SKP213-201ENST00000410746 298 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.92□□□□□ -1.46
CLCN3P51790 AC019070.1-201ENST00000415008 1024 ntBASIC5.92□□□□□ -1.46
CLCN3P51790 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.92□□□□□ -1.46
CLCN3P51790 AC093655.2-201ENST00000425735 631 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms