Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.64□□□□□ -1.51
TNFSF9P41273 AC022360.1-201ENST00000521058 340 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF9P41273 AP002373.2-201ENST00000541631 1060 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF9P41273 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF9P41273 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF9P41273 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF9P41273 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.64□□□□□ -1.51
TNFSF9P41273 AP005131.7-201ENST00000610087 611 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 AL121612.2-201ENST00000612261 482 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 MIR7155-201ENST00000615925 56 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 AF117829.2-201ENST00000619538 361 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 AC099494.2-201ENST00000623371 978 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 AC063952.1-203ENST00000634410 658 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 AC135068.12-201ENST00000637370 931 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TNFSF9P41273 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF9P41273 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF9P41273 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TNFSF9P41273 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF9P41273 AC073429.2-201ENST00000569694 1444 ntBASIC5.64□□□□□ -1.51
TNFSF9P41273 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF9P41273 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF9P41273 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF9P41273 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF9P41273 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF9P41273 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFSF9P41273 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TNFSF9P41273 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TNFSF9P41273 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 RN7SKP153-201ENST00000365026 316 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 OR1L6-202ENST00000373684 1044 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 RNU1-74P-201ENST00000384108 171 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 RNU11-201ENST00000387069 134 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 RNA5SP241-201ENST00000391326 114 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFSF9P41273 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AP000797.2-201ENST00000475768 606 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 RN7SL826P-201ENST00000479724 288 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 RPS24P16-201ENST00000497294 392 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AC110775.1-201ENST00000513721 462 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AP003080.1-202ENST00000526526 915 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AL360012.1-201ENST00000602813 131 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 AP005432.2-201ENST00000608162 586 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFSF9P41273 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 CASC19-222ENST00000641321 1173 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AC092451.3-201ENST00000625067 1343 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
TNFSF9P41273 AC140134.1-201ENST00000511830 3544 ntBASIC5.63□□□□□ -1.51
TNFSF9P41273 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFSF9P41273 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF9P41273 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
TNFSF9P41273 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
TNFSF9P41273 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
TNFSF9P41273 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TNFSF9P41273 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.62□□□□□ -1.51
TNFSF9P41273 RPL23AP27-201ENST00000415161 451 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.62□□□□□ -1.51
TNFSF9P41273 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC006455.6-201ENST00000426192 893 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 RPS27P18-201ENST00000431701 247 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 REG1CP-206ENST00000447469 496 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC020779.1-201ENST00000478757 796 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 COX6B1P2-201ENST00000489624 230 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC147055.3-201ENST00000510547 851 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.62□□□□□ -1.51
TNFSF9P41273 OR5D2P-201ENST00000524390 911 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TNFSF9P41273 HMGN2P6-201ENST00000551091 273 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 502.3 ms