Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
LIG1P18858 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 NAMPTP1-201ENST00000440465 2514 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AC068769.1-201ENST00000474767 2426 ntBASIC7.39□□□□□ -1.23
LIG1P18858 MTND5P24-201ENST00000438892 1767 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AL132640.2-201ENST00000559968 1698 ntBASIC7.39□□□□□ -1.23
LIG1P18858 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 AC011369.2-201ENST00000624423 1567 ntBASIC7.39□□□□□ -1.23
LIG1P18858 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 BIN2P1-201ENST00000504996 1530 ntBASIC7.39□□□□□ -1.23
LIG1P18858 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 SNORA38B-201ENST00000363524 131 ntBASIC7.39□□□□□ -1.23
LIG1P18858 RNU6-553P-201ENST00000364047 96 ntBASIC7.39□□□□□ -1.23
LIG1P18858 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.39□□□□□ -1.23
LIG1P18858 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.39□□□□□ -1.23
LIG1P18858 AC019178.1-201ENST00000392337 440 ntBASIC7.39□□□□□ -1.23
LIG1P18858 FDPSP5-201ENST00000399474 1057 ntBASIC7.39□□□□□ -1.23
LIG1P18858 RSL24D1P4-201ENST00000400938 484 ntBASIC7.39□□□□□ -1.23
LIG1P18858 MTND4LP20-201ENST00000402379 270 ntBASIC7.39□□□□□ -1.23
LIG1P18858 ATF1P1-201ENST00000406040 927 ntBASIC7.39□□□□□ -1.23
LIG1P18858 TANK-206ENST00000406287 875 ntTSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 AC006366.1-201ENST00000422002 759 ntBASIC7.39□□□□□ -1.23
LIG1P18858 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.39□□□□□ -1.23
LIG1P18858 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 RPL12P49-201ENST00000441100 121 ntBASIC7.39□□□□□ -1.23
LIG1P18858 FGF7P5-201ENST00000441829 291 ntBASIC7.39□□□□□ -1.23
LIG1P18858 SEPT14P24-201ENST00000447236 180 ntBASIC7.39□□□□□ -1.23
LIG1P18858 NECAP1P2-201ENST00000455668 727 ntBASIC7.39□□□□□ -1.23
LIG1P18858 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.39□□□□□ -1.23
LIG1P18858 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.39□□□□□ -1.23
LIG1P18858 AC104685.1-201ENST00000502445 371 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.39□□□□□ -1.23
LIG1P18858 AC021087.2-201ENST00000504656 1203 ntBASIC7.39□□□□□ -1.23
LIG1P18858 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 RNA5SP303-201ENST00000516192 130 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 ARGFXP2-201ENST00000579304 949 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.39□□□□□ -1.23
LIG1P18858 RN7SL622P-201ENST00000585292 275 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AP001269.3-201ENST00000588718 329 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.39□□□□□ -1.23
LIG1P18858 AC007204.2-201ENST00000615022 616 ntBASIC7.39□□□□□ -1.23
LIG1P18858 HTR1DP1-201ENST00000616500 888 ntBASIC7.39□□□□□ -1.23
LIG1P18858 AC091932.2-201ENST00000623014 291 ntBASIC7.39□□□□□ -1.23
LIG1P18858 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
LIG1P18858 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.39□□□□□ -1.23
LIG1P18858 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LIG1P18858 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.38□□□□□ -1.23
LIG1P18858 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.38□□□□□ -1.23
LIG1P18858 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
LIG1P18858 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
LIG1P18858 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
LIG1P18858 RN7SKP184-201ENST00000362348 333 ntBASIC7.38□□□□□ -1.23
LIG1P18858 RNU1-5P-201ENST00000362684 144 ntBASIC7.38□□□□□ -1.23
LIG1P18858 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIG1P18858 ATP5F1P3-201ENST00000397213 657 ntBASIC7.38□□□□□ -1.23
LIG1P18858 RPL5P20-201ENST00000403848 896 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AL033519.1-201ENST00000407266 307 ntBASIC7.38□□□□□ -1.23
LIG1P18858 U3.43-201ENST00000410734 213 ntBASIC7.38□□□□□ -1.23
LIG1P18858 RN7SKP161-201ENST00000411110 305 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC092638.1-201ENST00000411966 1275 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AL356968.2-201ENST00000412769 1257 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 MRPS21P5-201ENST00000417885 231 ntBASIC7.38□□□□□ -1.23
LIG1P18858 OR6C64P-201ENST00000419708 825 ntBASIC7.38□□□□□ -1.23
LIG1P18858 OR6R1P-201ENST00000431838 940 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.38□□□□□ -1.23
LIG1P18858 H3F3BP1-201ENST00000440551 403 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AL031681.1-201ENST00000443304 400 ntBASIC7.38□□□□□ -1.23
LIG1P18858 RAB28P3-201ENST00000448325 597 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC073476.1-201ENST00000452854 407 ntBASIC7.38□□□□□ -1.23
LIG1P18858 RPS7P7-201ENST00000463499 571 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.38□□□□□ -1.23
LIG1P18858 RPL7P41-201ENST00000485823 957 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.38□□□□□ -1.23
LIG1P18858 AC008549.1-201ENST00000512900 643 ntBASIC7.38□□□□□ -1.23
LIG1P18858 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.38□□□□□ -1.23
LIG1P18858 Vault.2-201ENST00000516519 98 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms