Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RN7SL690P-201ENST00000582087 240 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 AL391358.1-201ENST00000605342 190 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.85□□□□□ -1.47
COL11A1P12107 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.85□□□□□ -1.47
COL11A1P12107 AC006210.2-201ENST00000367074 1545 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 SNX18P3-202ENST00000565670 1750 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.85□□□□□ -1.47
COL11A1P12107 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.85□□□□□ -1.47
COL11A1P12107 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL11A1P12107 SNORA2.3-201ENST00000383920 135 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.85□□□□□ -1.47
COL11A1P12107 AC090018.1-201ENST00000434369 367 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 HMGN2P25-201ENST00000486956 268 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 CEACAMP10-202ENST00000495431 496 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.85□□□□□ -1.47
COL11A1P12107 AC084824.2-201ENST00000548906 345 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.85□□□□□ -1.47
COL11A1P12107 NMNAT1P1-201ENST00000554095 876 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 UBE2FP2-201ENST00000566646 462 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.85□□□□□ -1.47
COL11A1P12107 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.85□□□□□ -1.47
COL11A1P12107 AC068790.7-201ENST00000602347 528 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 AC105254.2-201ENST00000603636 436 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.85□□□□□ -1.47
COL11A1P12107 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.85□□□□□ -1.47
COL11A1P12107 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL11A1P12107 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL11A1P12107 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
COL11A1P12107 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
COL11A1P12107 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL11A1P12107 RNA5SP113-201ENST00000410486 84 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 RN7SKP100-201ENST00000411258 284 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 NPM1P40-201ENST00000412758 733 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 RSU1P3-201ENST00000412878 835 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 AL158827.1-201ENST00000416300 391 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.84□□□□□ -1.47
COL11A1P12107 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 AC099670.2-201ENST00000435130 321 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 AL137845.2-201ENST00000444292 988 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 AC023271.1-201ENST00000445936 1090 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.84□□□□□ -1.47
COL11A1P12107 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.84□□□□□ -1.47
COL11A1P12107 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 MIR6758-201ENST00000620653 63 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
COL11A1P12107 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.84□□□□□ -1.47
COL11A1P12107 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 AL731532.1-201ENST00000623972 4236 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.84□□□□□ -1.47
COL11A1P12107 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL11A1P12107 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL11A1P12107 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.84□□□□□ -1.47
COL11A1P12107 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL11A1P12107 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL11A1P12107 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL11A1P12107 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL11A1P12107 AC004076.2-201ENST00000620532 3323 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL11A1P12107 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL11A1P12107 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.83□□□□□ -1.48
COL11A1P12107 RPL5P25-201ENST00000441148 775 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 TCEA1P1-201ENST00000449716 880 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 RPS17P2-201ENST00000461663 408 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 PSAT1P4-201ENST00000466500 526 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 AC006463.2-201ENST00000473326 348 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 AC090142.2-201ENST00000483263 416 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 RPS24P16-201ENST00000497294 392 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 IGBP1P4-201ENST00000503202 879 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL11A1P12107 AC132825.1-201ENST00000463573 2247 ntBASIC5.83□□□□□ -1.48
COL11A1P12107 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL11A1P12107 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms