Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL5A2P05997 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL5A2P05997 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL5A2P05997 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL5A2P05997 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.78□□□□□ -1.32
COL5A2P05997 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL5A2P05997 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL5A2P05997 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL5A2P05997 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL5A2P05997 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL5A2P05997 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
COL5A2P05997 RPS3AP23-201ENST00000401762 784 ntBASIC6.78□□□□□ -1.32
COL5A2P05997 RSL24D1P6-201ENST00000426934 401 ntBASIC6.78□□□□□ -1.32
COL5A2P05997 AL161722.2-201ENST00000434731 981 ntBASIC6.78□□□□□ -1.32
COL5A2P05997 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 SCARNA9-201ENST00000530422 353 ntBASIC6.78□□□□□ -1.32
COL5A2P05997 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.78□□□□□ -1.32
COL5A2P05997 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.78□□□□□ -1.32
COL5A2P05997 AC011453.2-201ENST00000603737 729 ntBASIC6.78□□□□□ -1.32
COL5A2P05997 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.78□□□□□ -1.32
COL5A2P05997 AC010928.1-201ENST00000592477 1447 ntBASIC6.78□□□□□ -1.32
COL5A2P05997 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.77□□□□□ -1.33
COL5A2P05997 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.77□□□□□ -1.33
COL5A2P05997 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL5A2P05997 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 GNG5P2-201ENST00000372054 207 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.77□□□□□ -1.33
COL5A2P05997 Z97832.1-201ENST00000402490 328 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 SNORA77-201ENST00000408716 125 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.77□□□□□ -1.33
COL5A2P05997 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.77□□□□□ -1.33
COL5A2P05997 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 NUTF2P7-201ENST00000453086 375 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 AL356390.1-201ENST00000455684 397 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 RPL7P41-201ENST00000485823 957 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 RN7SL814P-201ENST00000487715 300 ntBASIC6.77□□□□□ -1.33
COL5A2P05997 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.77□□□□□ -1.33
COL5A2P05997 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.77□□□□□ -1.33
COL5A2P05997 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.77□□□□□ -1.33
COL5A2P05997 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.77□□□□□ -1.33
COL5A2P05997 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.77□□□□□ -1.33
COL5A2P05997 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.77□□□□□ -1.33
COL5A2P05997 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.77□□□□□ -1.33
COL5A2P05997 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL5A2P05997 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL5A2P05997 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL5A2P05997 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL5A2P05997 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.76□□□□□ -1.33
COL5A2P05997 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COL5A2P05997 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL5A2P05997 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.76□□□□□ -1.33
COL5A2P05997 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL5A2P05997 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL5A2P05997 RNA5SP479-201ENST00000364858 117 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL5A2P05997 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL5A2P05997 U3.28-201ENST00000391249 210 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 GTF2IP5-201ENST00000414608 731 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 AC007064.3-201ENST00000422608 359 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 AC009480.2-201ENST00000422916 432 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 CHIAP3-201ENST00000423668 1133 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.76□□□□□ -1.33
COL5A2P05997 TCEA1P1-201ENST00000449716 880 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 AURKAPS2-201ENST00000454983 333 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 RPL12P20-201ENST00000475538 479 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 AC020779.1-201ENST00000478757 796 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 RN7SL244P-201ENST00000493405 297 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.76□□□□□ -1.33
COL5A2P05997 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.76□□□□□ -1.33
COL5A2P05997 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.76□□□□□ -1.33
COL5A2P05997 SS18L2P2-201ENST00000583960 235 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 AC020910.3-201ENST00000603701 874 ntBASIC6.76□□□□□ -1.33
COL5A2P05997 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.76□□□□□ -1.33
COL5A2P05997 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL5A2P05997 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL5A2P05997 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL5A2P05997 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL5A2P05997 Y_RNA.126-201ENST00000363382 111 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms