Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SMAD6O43541 KYNUP3-201ENST00000574386 1341 ntBASIC5.65□□□□□ -1.51
SMAD6O43541 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.65□□□□□ -1.51
SMAD6O43541 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMAD6O43541 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.65□□□□□ -1.51
SMAD6O43541 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.65□□□□□ -1.51
SMAD6O43541 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SMAD6O43541 AL512283.1-201ENST00000606756 1384 ntBASIC5.65□□□□□ -1.51
SMAD6O43541 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMAD6O43541 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.65□□□□□ -1.51
SMAD6O43541 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SMAD6O43541 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMAD6O43541 CR382285.2-201ENST00000624662 1495 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AC144833.1-201ENST00000567953 4089 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
SMAD6O43541 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.64□□□□□ -1.51
SMAD6O43541 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SMAD6O43541 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.64□□□□□ -1.51
SMAD6O43541 AL121886.1-201ENST00000358609 435 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 RNA5SP319-201ENST00000362768 119 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 RNU4-2-201ENST00000365668 141 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 SNORA16A-201ENST00000384342 137 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 MT-RNR1-201ENST00000389680 954 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 RPSAP35-201ENST00000413753 818 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 METTL15P3-201ENST00000415522 1221 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.64□□□□□ -1.51
SMAD6O43541 AC007161.1-204ENST00000423039 460 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.64□□□□□ -1.51
SMAD6O43541 TMEM183AP1-205ENST00000432739 290 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 CFL1P1-202ENST00000432948 411 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.64□□□□□ -1.51
SMAD6O43541 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.64□□□□□ -1.51
SMAD6O43541 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.64□□□□□ -1.51
SMAD6O43541 RN7SL583P-201ENST00000475692 287 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 UBA52P7-201ENST00000486088 380 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.64□□□□□ -1.51
SMAD6O43541 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.64□□□□□ -1.51
SMAD6O43541 HMGN1P15-201ENST00000513870 295 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AP001372.4-201ENST00000524889 472 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AP000859.1-201ENST00000525536 307 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AL121594.4-201ENST00000556211 1196 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.64□□□□□ -1.51
SMAD6O43541 AP001357.1-201ENST00000586304 1053 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 SUGT1P3-202ENST00000604259 383 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AC097065.2-201ENST00000608159 533 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.64□□□□□ -1.51
SMAD6O43541 AC008833.1-201ENST00000611633 691 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 AC005840.5-201ENST00000619166 599 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 MIR8080-201ENST00000622224 89 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 AL049777.1-201ENST00000622740 518 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.64□□□□□ -1.51
SMAD6O43541 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.64□□□□□ -1.51
SMAD6O43541 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.64□□□□□ -1.51
SMAD6O43541 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SMAD6O43541 OR51C1P-202ENST00000641159 1444 ntBASIC5.64□□□□□ -1.51
SMAD6O43541 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMAD6O43541 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.64□□□□□ -1.51
SMAD6O43541 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 MT-RNR2-201ENST00000387347 1559 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 AC087516.1-201ENST00000561236 2428 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 AC123769.1-201ENST00000530992 3192 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SMAD6O43541 RN7SKP6-201ENST00000364795 319 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 RN7SKP59-201ENST00000410520 314 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 SNORA79B-201ENST00000410557 148 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.63□□□□□ -1.51
SMAD6O43541 RNF10P1-201ENST00000418589 369 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 AC244033.1-201ENST00000426826 870 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 ZFAND6P1-201ENST00000434138 605 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC009963.4-201ENST00000448535 339 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AL133445.1-201ENST00000467051 452 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC068587.2-201ENST00000478386 781 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms