Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 PPIAP9-201ENST00000403866 498 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 GTF2IP5-201ENST00000414608 731 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 TRIM60P17-201ENST00000415181 719 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 IPPKP1-201ENST00000422501 768 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AL133173.1-201ENST00000423458 397 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 FMO7P-201ENST00000436045 768 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 IGBP1P3-201ENST00000447449 1000 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AL358876.1-201ENST00000453364 1075 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 RN7SL72P-201ENST00000460697 269 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 NRBF2P4-201ENST00000520874 850 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AC106730.2-201ENST00000566641 540 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 HMGB1P51-201ENST00000605166 638 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AL096803.3-201ENST00000609032 532 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AC008759.3-201ENST00000613300 508 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AL162574.1-201ENST00000615702 950 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AC007998.4-201ENST00000612496 2533 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 AL137058.3-201ENST00000624531 3099 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 SAMM50P1-201ENST00000455403 1399 ntBASIC5.8□□□□□ -1.48
TCRBV5S1A1TA0A578 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 RNA5SP284-201ENST00000384547 118 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 RPL34P3-201ENST00000421454 338 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC013262.1-201ENST00000426710 252 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 RPS27AP6-201ENST00000427962 448 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 BX119321.1-201ENST00000428912 797 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 MTCO1P45-201ENST00000431457 267 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AL359265.1-201ENST00000440296 795 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AL450996.1-201ENST00000445574 1202 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 RPSAP51-201ENST00000497462 645 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 MRPS21P7-201ENST00000566937 238 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC004775.1-201ENST00000607389 753 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AC087683.2-201ENST00000611384 326 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 AL118522.2-201ENST00000616045 615 ntBASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV5S1A1TA0A578 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TCRBV5S1A1TA0A578 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV5S1A1TA0A578 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV5S1A1TA0A578 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV5S1A1TA0A578 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms