Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC005261.6-201ENST00000623072 1387 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 RN7SKP145-201ENST00000363291 303 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 SNORA70-201ENST00000384436 135 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 PPIAP9-201ENST00000403866 498 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 RANP1-206ENST00000455094 651 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 ABCC13-202ENST00000463099 3842 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AL133445.1-201ENST00000467051 452 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC100832.1-201ENST00000471945 383 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC231760.1-201ENST00000498002 260 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 LSM3P2-201ENST00000551246 273 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC016769.4-201ENST00000616893 535 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AC118658.2-201ENST00000618697 459 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 MIR8080-201ENST00000622224 89 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 CASC19-222ENST00000641321 1173 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 MRRFP1-201ENST00000435941 1675 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 RNA5SP234-201ENST00000363916 119 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 GABARAPL3-201ENST00000412799 354 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 SRSF1P1-201ENST00000424058 520 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 CYCSP51-201ENST00000443545 318 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 RPL35AP19-201ENST00000469425 329 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 OR5M14P-201ENST00000506803 618 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 SCARNA20.4-201ENST00000516969 131 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC000068.2-201ENST00000608816 460 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC004808.2-201ENST00000627965 773 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AL138820.1-201ENST00000617901 5305 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 AC100757.1-201ENST00000616872 1835 ntBASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTNNA3Q9UI47 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC007342.5-201ENST00000571340 2142 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AL121878.1-201ENST00000418638 859 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 GSTM5P1-201ENST00000434751 660 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC092754.1-201ENST00000472975 479 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 SNORA26.10-201ENST00000516427 141 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 SEPT10P1-201ENST00000517342 1162 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 BLZF2P-201ENST00000553776 1130 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 OR11H3P-201ENST00000554547 982 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC005341.1-201ENST00000571086 708 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC135068.5-201ENST00000624197 983 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 SAMMSON-227ENST00000642114 1199 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms