Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC138627.1-203ENST00000641872 1680 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 NCOA4P3-201ENST00000513203 1877 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 DDX10P2-201ENST00000417796 2614 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AL451142.2-201ENST00000429076 2090 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 SSX9-201ENST00000376909 591 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 RPS3AP5-201ENST00000389400 821 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC084880.1-201ENST00000392530 545 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 BZW2-203ENST00000407633 898 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 RN7SKP235-201ENST00000410662 305 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC211486.3-201ENST00000412694 621 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 JKAMPP1-201ENST00000413804 919 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 SNRPFP1-201ENST00000414761 252 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC069213.2-201ENST00000420238 366 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 RWDD4P2-201ENST00000426392 563 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC079781.2-201ENST00000446424 169 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 CDC42P2-201ENST00000448566 569 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 LINC01231-201ENST00000452746 886 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 SULT1D1P-201ENST00000458020 882 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC016546.1-201ENST00000473590 463 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 RN7SL705P-201ENST00000481678 294 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 RPS4XP18-201ENST00000495480 763 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 KIR3DP1-201ENST00000580853 628 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 MIR3118-1-201ENST00000581787 76 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC004853.2-201ENST00000609561 916 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC007450.2-201ENST00000614160 290 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 CCL17-202ENST00000616880 550 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC091953.2-201ENST00000623979 160 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC130448.2-201ENST00000624082 374 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC239585.2-201ENST00000624269 557 ntTSL 4 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC097493.5-201ENST00000641103 1010 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 CKAP2P1-201ENST00000555477 2049 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 AC011460.1-201ENST00000636268 1834 ntBASIC9.56□□□□□ -0.88
RTN4Q9NQC3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTN4Q9NQC3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC105074.1-201ENST00000623380 3095 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC012360.3-201ENST00000610036 3449 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 Y_RNA.72-201ENST00000362894 103 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 RNU4-76P-201ENST00000364509 141 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 MIR671-201ENST00000390183 118 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 FTH1P10-201ENST00000401830 930 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 RNU6-373P-201ENST00000411247 98 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 LINC00525-201ENST00000412730 1188 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 TRAPPC2P10-201ENST00000415662 323 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC019097.1-201ENST00000424783 735 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 IMP3P1-201ENST00000427532 557 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms