Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC073592.6-201ENST00000624271 415 ntBASIC4.83□□□□□ -1.64
HMG20AQ9NP66 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HMG20AQ9NP66 AC120338.1-201ENST00000625074 1541 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 DDX18P4-201ENST00000511690 1966 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 RNA5SP273-201ENST00000362484 113 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 MRPL35P2-201ENST00000448009 511 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 YRDCP3-201ENST00000456507 480 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 RPS17P15-201ENST00000475609 349 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 KATNBL1P4-201ENST00000503545 918 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC022360.1-201ENST00000521058 340 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 IGLV3-30-201ENST00000524362 298 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AP000648.1-201ENST00000529682 397 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AC233280.2-201ENST00000603917 1070 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 AL031601.1-201ENST00000605702 394 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
HMG20AQ9NP66 HSPA8P18-201ENST00000439846 1928 ntBASIC4.82□□□□□ -1.64
HMG20AQ9NP66 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 OR9G4-201ENST00000302957 984 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 RNA5SP477-201ENST00000362639 119 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 RN7SKP16-201ENST00000410180 299 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AK4P4-201ENST00000419465 646 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 MARK2P12-201ENST00000420129 585 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC069154.1-201ENST00000432914 542 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC073587.1-201ENST00000447093 876 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AL445433.1-201ENST00000457507 257 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC073610.1-201ENST00000489971 396 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC022133.1-201ENST00000490961 571 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 EIF4E2P2-201ENST00000492033 736 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC025458.1-201ENST00000506046 166 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 OR5H7P-201ENST00000514084 930 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 Y_RNA.667-201ENST00000516212 107 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 RNA5SP438-201ENST00000516561 112 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC021678.3-201ENST00000517893 476 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC011853.1-201ENST00000518911 454 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC027369.2-201ENST00000528030 440 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 OR7M1P-201ENST00000608946 533 ntBASIC4.81□□□□□ -1.64
HMG20AQ9NP66 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20AQ9NP66 AC129778.1-202ENST00000623812 261 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms