Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AL353729.2-201ENST00000605859 1249 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AL445670.1-201ENST00000618889 801 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC105105.5-201ENST00000622635 1294 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 RNA5SP507-201ENST00000363603 121 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 KIF4CP-201ENST00000422742 1279 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 AL590762.4-201ENST00000425885 253 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 AC009784.1-201ENST00000426484 460 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 TRIM60P16-201ENST00000444048 694 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 RPL12P39-201ENST00000455456 496 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 RN7SL727P-201ENST00000482164 296 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 NPM1P29-201ENST00000483112 803 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 HIGD1AP14-201ENST00000507617 282 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 PCNAP4-201ENST00000532690 730 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 IMMP1LP3-201ENST00000604197 224 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 TMEM30CP-203ENST00000637814 1035 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 AL022322.2-201ENST00000624072 20397 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 AC008079.2-201ENST00000623543 20396 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 AP001642.1-201ENST00000624727 2117 ntBASIC5.57□□□□□ -1.52
TRIM4Q9C037 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM4Q9C037 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM4Q9C037 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM4Q9C037 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 ADAM5-202ENST00000399789 1942 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM4Q9C037 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM4Q9C037 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 RN7SKP125-201ENST00000410481 302 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC099677.3-201ENST00000427081 395 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 Z80107.2-201ENST00000445127 392 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AL445466.1-201ENST00000448432 357 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC004129.2-201ENST00000457229 287 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 RNA5SP103-201ENST00000459503 118 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC005532.2-201ENST00000467154 373 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AL157777.1-201ENST00000468100 304 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 RN7SL30P-201ENST00000488416 306 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 RN7SL346P-201ENST00000491561 294 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC093890.1-201ENST00000502554 540 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC147055.3-201ENST00000510547 851 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 MIR2117-201ENST00000516780 80 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC007346.2-201ENST00000564816 892 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM4Q9C037 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 GNL2P1-201ENST00000451274 2190 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 AC104623.2-202ENST00000623477 4002 ntBASIC5.56□□□□□ -1.52
TRIM4Q9C037 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM4Q9C037 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM4Q9C037 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM4Q9C037 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM4Q9C037 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms