Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC105105.5-201ENST00000622635 1294 ntBASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC104985.3-201ENST00000623479 597 ntBASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 OFD1P17-201ENST00000437639 3018 ntBASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHAMP1Q96JM3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC099786.3-201ENST00000565735 1410 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC024651.2-201ENST00000562480 2098 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC130304.1-201ENST00000622942 2385 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 Y_RNA.318-201ENST00000365131 97 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 RN7SKP108-201ENST00000411367 328 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC098592.2-201ENST00000413158 265 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 RAB9AP4-201ENST00000415230 609 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 HIGD1AP4-201ENST00000430194 280 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 CUBNP2-201ENST00000443534 1139 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC092691.2-201ENST00000461787 803 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC090058.1-201ENST00000498788 435 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC010486.2-201ENST00000505572 483 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC147055.3-201ENST00000510547 851 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC133963.2-201ENST00000513686 578 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 BUD31P1-201ENST00000521828 359 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AL356057.1-201ENST00000533798 831 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 ZNF321P-202ENST00000550843 495 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC025283.1-201ENST00000572039 734 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC119403.2-201ENST00000590960 598 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC073387.2-201ENST00000604797 784 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC012213.4-201ENST00000606457 354 ntBASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHAMP1Q96JM3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 ZNF90P1-201ENST00000480493 1951 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 OR5H2-201ENST00000355273 945 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 VIM2P-201ENST00000402383 1294 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 RPL12P12-201ENST00000424633 501 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 AL645939.3-201ENST00000435408 225 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 KRT8P51-201ENST00000438938 274 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 DNAJC19P5-201ENST00000443295 316 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 MTND1P29-201ENST00000448112 647 ntBASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.92□□□□□ -1.3
CHAMP1Q96JM3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms