Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 VTI1BP4-201ENST00000427516 527 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC013410.1-201ENST00000436223 1232 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 AL450996.1-201ENST00000445574 1202 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 SNRPCP3-201ENST00000474888 476 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC015908.1-201ENST00000478739 476 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 EIF3LP3-201ENST00000495197 822 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC138866.2-201ENST00000508650 584 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC098976.1-201ENST00000513014 541 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 RNU6-415P-201ENST00000516252 97 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 SNORA26.10-201ENST00000516427 141 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 NRBF2P4-201ENST00000520874 850 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC051619.2-201ENST00000559063 397 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTP4Q96DX8 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AP003117.1-201ENST00000602771 554 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC013244.1-201ENST00000604279 193 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC008833.1-201ENST00000611633 691 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC092376.2-201ENST00000622621 4116 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 AP000432.2-201ENST00000624164 2048 ntBASIC5.6□□□□□ -1.51
RTP4Q96DX8 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTP4Q96DX8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTP4Q96DX8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
RTP4Q96DX8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTP4Q96DX8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 YES1P1-201ENST00000418510 1628 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 MIR1178-201ENST00000408396 91 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AL596448.1-201ENST00000415024 392 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AL662874.1-201ENST00000426065 230 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 NPM1P25-201ENST00000429734 854 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 RPL12P17-201ENST00000432393 498 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 ABCC13-202ENST00000463099 3842 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 IGBP1P4-201ENST00000503202 879 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC008638.1-201ENST00000506035 866 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 OR51A1P-201ENST00000511110 946 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 SNORA43.3-201ENST00000517240 103 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 HNRNPRP2-201ENST00000528421 743 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 MRPS21P7-201ENST00000566937 238 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC090286.3-201ENST00000573133 187 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 RN7SL290P-201ENST00000578661 300 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC012616.1-201ENST00000600294 197 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AP000769.2-201ENST00000602344 396 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC098483.2-201ENST00000603158 454 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC034229.4-201ENST00000607861 441 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC110792.4-201ENST00000609843 298 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.59□□□□□ -1.51
RTP4Q96DX8 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTP4Q96DX8 AC003973.3-201ENST00000624863 2822 ntBASIC5.59□□□□□ -1.51
RTP4Q96DX8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.59□□□□□ -1.52
RTP4Q96DX8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RTP4Q96DX8 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.58□□□□□ -1.52
RTP4Q96DX8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RTP4Q96DX8 OR51C1P-202ENST00000641159 1444 ntBASIC5.58□□□□□ -1.52
RTP4Q96DX8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTP4Q96DX8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RTP4Q96DX8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RTP4Q96DX8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTP4Q96DX8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RTP4Q96DX8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RTP4Q96DX8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTP4Q96DX8 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RTP4Q96DX8 OR1F12-201ENST00000402365 945 ntBASIC5.58□□□□□ -1.52
RTP4Q96DX8 RN7SKP278-201ENST00000410504 342 ntBASIC5.58□□□□□ -1.52
RTP4Q96DX8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.58□□□□□ -1.52
RTP4Q96DX8 AL357078.2-201ENST00000416486 427 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms