Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AL355488.2-201ENST00000609909 2850 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AL161756.3-201ENST00000641216 2071 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC011933.2-201ENST00000578539 2790 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC027088.4-201ENST00000611559 1947 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC023490.2-201ENST00000359859 470 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC087752.1-201ENST00000391360 558 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC016739.1-201ENST00000405359 345 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RN7SKP279-201ENST00000411383 298 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC069282.1-201ENST00000411911 526 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 MRPL53P1-201ENST00000414323 319 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 MTCYBP7-201ENST00000419540 1134 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RNGTTP1-201ENST00000420965 728 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 MTND6P12-201ENST00000428247 522 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 Z84478.1-201ENST00000438230 1219 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RPS12P17-201ENST00000438591 377 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 CYCSP51-201ENST00000443545 318 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 OR2AF1P-201ENST00000454899 889 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 LDHBP2-201ENST00000456969 1005 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RPL7P51-201ENST00000490532 749 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RPEP1-201ENST00000504507 658 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 GLUD1P3-202ENST00000508551 200 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC021146.7-201ENST00000509604 775 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RNU6-334P-201ENST00000517072 102 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 UBTFL9-201ENST00000534504 1148 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC090424.1-201ENST00000535243 736 ntBASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
CHMP4CQ96CF2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 MFSD8-219ENST00000641228 2559 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 HSPA8P19-201ENST00000505359 1517 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 RNU1-150P-201ENST00000362491 162 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 MTCO2P1-201ENST00000424648 477 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 MGAT2P2-201ENST00000427194 797 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 BX119321.1-201ENST00000428912 797 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 ATP5G1P3-201ENST00000463301 410 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC092905.1-201ENST00000467527 949 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 ST13P12-201ENST00000508958 1094 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC026782.2-201ENST00000510845 636 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 RN7SKP157-201ENST00000516174 282 ntBASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4CQ96CF2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms