Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC002524.1-201ENST00000411687 547 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AL139158.1-201ENST00000424719 340 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RPS26P4-201ENST00000431743 355 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 NDUFB4P8-201ENST00000435351 367 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RPS10P18-201ENST00000442662 495 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC092106.1-201ENST00000444291 373 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RPS15AP29-201ENST00000445539 400 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC007383.1-201ENST00000445875 636 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 NPM1P39-201ENST00000449818 867 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 KF459542.1-201ENST00000450908 553 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC022431.1-201ENST00000450941 438 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RN7SL568P-201ENST00000493069 298 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 EIF3LP3-201ENST00000495197 822 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 GAPDHP71-201ENST00000511530 1003 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RN7SKP253-201ENST00000516424 309 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 TMEM97P2-201ENST00000517841 403 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AL731537.2-201ENST00000561565 951 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AP001496.3-201ENST00000580230 913 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RN7SL230P-201ENST00000580835 303 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC006272.2-201ENST00000594725 163 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC124916.2-201ENST00000604416 224 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AL139124.1-201ENST00000609123 421 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AP005131.7-201ENST00000610087 611 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC024884.1-201ENST00000620583 399 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VPS33AQ96AX1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AF287957.1-201ENST00000607368 1595 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC007382.1-201ENST00000624376 2618 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL034417.1-201ENST00000399343 800 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RANP4-201ENST00000413361 655 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 MRPL53P1-201ENST00000414323 319 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RNF10P1-201ENST00000418589 369 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 PNKDP1-201ENST00000435914 430 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 CACYBPP1-201ENST00000438592 684 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 MTCYBP12-201ENST00000440559 1134 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RPL5P7-201ENST00000444235 813 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC005165.2-201ENST00000466070 380 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC096741.1-201ENST00000472250 846 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC098818.1-201ENST00000478593 252 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RPL7AP10-201ENST00000481016 791 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RN7SL57P-201ENST00000493687 290 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC108120.2-201ENST00000512973 294 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 SEPT10P1-201ENST00000517342 1162 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 NPM1P35-201ENST00000533043 868 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 BTG1P1-201ENST00000540396 508 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC011500.1-201ENST00000601963 469 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL021368.1-201ENST00000607490 540 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC108673.3-201ENST00000609183 335 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC010632.3-201ENST00000611377 369 ntBASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms