Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 NANOGP3-201ENST00000605855 286 ntBASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 AL512427.1-201ENST00000618593 349 ntBASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 AL669942.2-201ENST00000620352 697 ntBASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 AC093225.1-201ENST00000506867 1408 ntBASIC5.91□□□□□ -1.46
ATG4AQ8WYN0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 TMSB4XP2-201ENST00000335179 210 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RNU6-1251P-201ENST00000364502 107 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC005042.1-201ENST00000393397 800 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 TAF9BP2-201ENST00000400856 499 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 HMGB3P19-201ENST00000403971 560 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 OR10T1P-201ENST00000424327 947 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 VN1R42P-201ENST00000424651 344 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RPL5P2-201ENST00000429598 854 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RPL6P30-201ENST00000443382 862 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC104339.1-201ENST00000465478 348 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC099521.1-201ENST00000482557 334 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RN7SL193P-201ENST00000491708 276 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RPS17P5-201ENST00000498293 408 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 BOLA3P3-201ENST00000505182 232 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 SUMO2P5-201ENST00000506790 245 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC097486.1-201ENST00000515331 210 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP287-201ENST00000516546 266 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AL512310.9-201ENST00000553311 948 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC025918.2-201ENST00000558683 763 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC009962.1-201ENST00000567327 3813 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC138207.8-204ENST00000579588 527 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC124283.4-201ENST00000581815 456 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC018809.2-201ENST00000602436 3823 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC005034.4-201ENST00000603612 899 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC093424.1-201ENST00000604999 338 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AC015922.4-201ENST00000612568 690 ntBASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4AQ8WYN0 HSPD1P7-201ENST00000447985 1686 ntBASIC5.9□□□□□ -1.47
ATG4AQ8WYN0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4AQ8WYN0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ATG4AQ8WYN0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
ATG4AQ8WYN0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.9□□□□□ -1.47
ATG4AQ8WYN0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.9□□□□□ -1.47
ATG4AQ8WYN0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AC007938.2-201ENST00000604666 2634 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 SNORA70.6-201ENST00000383934 134 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 RNU6-468P-201ENST00000384003 109 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 BX284632.2-201ENST00000421091 399 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 OR5W1P-201ENST00000423705 938 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 MTCO1P51-201ENST00000427672 1060 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 BX119321.1-201ENST00000428912 797 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AC092447.2-201ENST00000435487 669 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 EIF5AP4-201ENST00000441206 465 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AL512605.1-202ENST00000441919 381 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AL359955.2-201ENST00000445380 353 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AC023271.1-201ENST00000445936 1090 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 RPS23P2-201ENST00000463671 415 ntBASIC5.89□□□□□ -1.47
ATG4AQ8WYN0 RPSAP37-201ENST00000470913 821 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms