Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC109780.1-201ENST00000451768 1344 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC117409.1-201ENST00000470499 1310 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC007159.1-201ENST00000566529 4706 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 RNU6-31P-201ENST00000384388 108 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 RNA5SP105-201ENST00000391123 113 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 MIR937-201ENST00000401271 86 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AL121977.1-201ENST00000401636 979 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 RN7SKP151-201ENST00000410230 316 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 RPL35AP24-201ENST00000413846 330 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 NIFKP3-201ENST00000417799 865 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AL606495.1-201ENST00000422100 813 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC113412.1-201ENST00000425840 504 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 CUBNP2-201ENST00000443534 1139 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AL353898.1-201ENST00000444055 238 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AL450996.1-201ENST00000445574 1202 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC100832.1-201ENST00000471945 383 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 COPS8P2-201ENST00000473228 627 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC025918.2-201ENST00000558683 763 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 MIR132-201ENST00000591554 101 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AP001033.2-201ENST00000609701 1003 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC023510.2-201ENST00000622162 746 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AL590763.1-201ENST00000398297 1545 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 HSPD1P7-201ENST00000447985 1686 ntBASIC5.82□□□□□ -1.48
HMGB4Q8WW32 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 ZNF90P1-201ENST00000480493 1951 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AL159987.1-201ENST00000347911 293 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 SNORA70-201ENST00000384436 135 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 MIR1286-201ENST00000408112 78 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 RPS26P13-201ENST00000419030 330 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 VN1R37P-201ENST00000419096 748 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 MTCYBP29-201ENST00000436327 1006 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 SBDSP1-204ENST00000453858 737 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 RPL7L1P3-201ENST00000455249 689 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AL603882.1-201ENST00000463059 681 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 RPL32P14-201ENST00000463196 378 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC087672.1-201ENST00000479876 766 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 NAMPTP2-201ENST00000505629 1115 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 RN7SKP288-201ENST00000516227 268 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 RNA5SP92-201ENST00000516437 110 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC138701.1-201ENST00000524329 714 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC004825.1-201ENST00000555068 586 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms