Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 PCAT14-202ENST00000627127 3935 ntBASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.42□□□□□ -1.54
LSMEM1Q8N8F7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC093225.1-201ENST00000506867 1408 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RNU4-44P-201ENST00000363050 141 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 HMGB1P13-201ENST00000406019 642 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RNU2-17P-201ENST00000410290 190 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RN7SKP86-201ENST00000410454 332 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC013404.1-201ENST00000413068 249 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL359885.1-201ENST00000415786 903 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC073464.3-201ENST00000422564 712 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC009965.2-201ENST00000425328 970 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RPS4XP16-201ENST00000427198 791 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 PTP4A1P3-201ENST00000433661 420 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RPS20P1-201ENST00000434853 354 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL031663.1-201ENST00000437445 219 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC096775.1-201ENST00000437724 448 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL353662.1-201ENST00000439099 327 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC092685.1-201ENST00000447960 1243 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 FRG2FP-204ENST00000453982 852 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 MTND6P6-201ENST00000478031 263 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RPL38P3-201ENST00000484463 213 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 PDCL3P4-201ENST00000489621 720 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC008629.2-201ENST00000503783 483 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 COL6A4P2-205ENST00000509855 506 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 GAPDHP62-201ENST00000515313 990 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RNU6-347P-201ENST00000516658 105 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 SMARCE1P4-201ENST00000523647 241 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC027369.2-201ENST00000528030 440 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC090424.1-201ENST00000535243 736 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC018552.3-201ENST00000567416 561 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC007346.1-201ENST00000569208 867 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC135178.6-201ENST00000605314 398 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 MIR6813-201ENST00000621638 56 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC090617.9-201ENST00000623751 147 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC111152.1-202ENST00000635848 339 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LSMEM1Q8N8F7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 AC090181.3-201ENST00000624777 1514 ntBASIC5.4□□□□□ -1.54
LSMEM1Q8N8F7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms