Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC104339.1-201ENST00000465478 348 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 OR8A2P-201ENST00000528631 952 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC068305.2-201ENST00000550567 1205 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC015849.6-201ENST00000605454 474 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC024884.1-201ENST00000620583 399 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AL683826.1-201ENST00000624104 627 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC009950.2-201ENST00000636548 183 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 AC000374.1-201ENST00000434698 1745 ntBASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUDCD3Q8IVD9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC025574.1-201ENST00000554784 1653 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC063976.2-201ENST00000425667 3556 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC005294.1-201ENST00000355509 281 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 MIR375-201ENST00000362103 64 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 RNA5SP223-201ENST00000365174 120 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 SNORA16A-201ENST00000384342 137 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 MIR589-201ENST00000385238 99 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AL133173.1-201ENST00000423458 397 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 MTND6P12-201ENST00000428247 522 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 BX842559.2-201ENST00000451418 605 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC005165.2-201ENST00000466070 380 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AP004607.2-201ENST00000533949 322 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC092121.1-201ENST00000569452 202 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC012616.1-201ENST00000600294 197 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 MIR6780B-201ENST00000610307 79 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC073592.6-201ENST00000624271 415 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC129915.3-201ENST00000634128 948 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AC073869.10-201ENST00000642016 354 ntBASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUDCD3Q8IVD9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 RNU1-146P-201ENST00000364015 165 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 HSPA8P15-201ENST00000401676 786 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 SNORA81-201ENST00000408493 178 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 RN7SKP16-201ENST00000410180 299 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 MARK2P12-201ENST00000420129 585 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 NPM1P48-201ENST00000436002 853 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AC019084.1-201ENST00000457337 432 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AC058823.1-201ENST00000485315 474 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL117692.1-201ENST00000494283 713 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 SNORA43.3-201ENST00000517240 103 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AC009597.2-201ENST00000604659 592 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL162431.4-201ENST00000604674 411 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL359091.2-201ENST00000609303 556 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 BX005214.3-202ENST00000619809 325 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AL357153.4-201ENST00000620487 1016 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms