Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SNORA43.3-201ENST00000517240 103 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 MTND2P32-201ENST00000521584 1038 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC015911.5-201ENST00000587076 451 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL139124.1-201ENST00000609123 421 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC084782.3-201ENST00000612282 578 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL096712.1-201ENST00000614561 159 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC007786.3-201ENST00000615154 596 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL390318.1-201ENST00000624564 687 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 CU459211.1-201ENST00000635667 749 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL359715.3-201ENST00000569267 2123 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 CASC19-261ENST00000641853 1638 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC144833.1-201ENST00000567953 4089 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 MIR133A2-201ENST00000347538 102 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 HMGN1P20-201ENST00000411849 300 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC093155.2-201ENST00000420734 937 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 HMGB3P5-201ENST00000428894 612 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC114973.1-201ENST00000429057 632 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 NPM1P25-201ENST00000429734 854 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 SUMO2P3-201ENST00000438311 288 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 LARP7P4-201ENST00000481075 878 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC091912.1-201ENST00000511351 248 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC079064.1-201ENST00000528365 362 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC027216.1-201ENST00000577726 685 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 RN7SL339P-201ENST00000580597 296 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC005726.4-201ENST00000582858 458 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC091057.3-201ENST00000602684 733 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 MIR193BHG-214ENST00000641765 509 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AC079097.1-201ENST00000512187 1399 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 MT-RNR2-201ENST00000387347 1559 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 OR13C1P-202ENST00000641378 2919 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 AL022311.1-201ENST00000623726 19416 ntBASIC5.5□□□□□ -1.53
ZNF549Q6P9A3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms