Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC012512.1-201ENST00000446594 718 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN1BQ07699 KF459542.1-201ENST00000450908 553 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN1BQ07699 HMGB1P4-201ENST00000455362 567 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 RNU7-27P-201ENST00000459281 62 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC006539.1-201ENST00000481419 501 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC093890.1-201ENST00000502554 540 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC113367.2-201ENST00000505749 160 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN1BQ07699 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN1BQ07699 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN1BQ07699 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC008083.2-201ENST00000546707 476 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN1BQ07699 CKS1BP1-201ENST00000555221 240 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC027176.2-201ENST00000559166 746 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC068714.1-201ENST00000559623 800 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN1BQ07699 MRPS21P8-201ENST00000569196 235 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 COX6CP7-201ENST00000597056 208 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AL021368.1-201ENST00000607490 540 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC006453.5-201ENST00000636451 619 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN1BQ07699 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN1BQ07699 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC012254.3-201ENST00000591183 2117 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN1BQ07699 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN1BQ07699 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN1BQ07699 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 AL034417.1-201ENST00000399343 800 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 NPM1P40-201ENST00000412758 733 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 RPL7AP51-201ENST00000422016 760 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AL512593.1-201ENST00000444758 779 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AC099063.2-201ENST00000446360 662 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AC016027.4-201ENST00000450866 277 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 RNU1-88P-201ENST00000459274 128 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 METTL15P1-201ENST00000481421 1045 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
SCN1BQ07699 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 NACAP5-201ENST00000509863 636 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 MAST4-IT1-201ENST00000514241 658 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN1BQ07699 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN1BQ07699 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.07□□□□□ -1.6
SCN1BQ07699 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 AC005242.1-201ENST00000585658 438 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN1BQ07699 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 AL645933.2-201ENST00000606743 1207 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AL135999.3-201ENST00000610501 812 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AL445670.1-201ENST00000618889 801 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 MIR6813-201ENST00000621638 56 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN1BQ07699 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN1BQ07699 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN1BQ07699 BX005019.1-201ENST00000561881 1810 ntBASIC5.07□□□□□ -1.6
SCN1BQ07699 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN1BQ07699 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 MUC2-202ENST00000613187 4845 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms