Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MIR133B-201ENST00000362210 119 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDK3Q00526 SNORA16A-201ENST00000384342 137 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK3Q00526 RPL35AP24-201ENST00000413846 330 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 AL355433.1-201ENST00000422804 300 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 PRUNEP1-201ENST00000425846 705 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK3Q00526 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 IGBP1P3-201ENST00000447449 1000 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 RN7SL447P-201ENST00000494711 245 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK3Q00526 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK3Q00526 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK3Q00526 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 AP005403.1-201ENST00000579720 229 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK3Q00526 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK3Q00526 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK3Q00526 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 AC015922.4-201ENST00000612568 690 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 AC136428.4-201ENST00000634254 1155 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 AC104964.3-201ENST00000606115 2860 ntBASIC5.42□□□□□ -1.54
CDK3Q00526 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK3Q00526 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK3Q00526 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 AC003985.2-201ENST00000562268 1669 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AC116158.1-201ENST00000560231 2129 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CDK3Q00526 RNA5SP183-201ENST00000362452 119 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 SNORA27.3-201ENST00000364937 134 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDK3Q00526 ST13P16-201ENST00000401760 781 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 MIR1286-201ENST00000408112 78 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AL390774.1-201ENST00000411924 246 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK3Q00526 AP000534.2-201ENST00000412729 568 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AL133325.1-201ENST00000421090 382 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 MTND2P11-201ENST00000423638 648 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 SRSF1P1-201ENST00000424058 520 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 RPL7P56-201ENST00000429441 717 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 RPL7L1P9-201ENST00000431298 745 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK3Q00526 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 RPS15AP29-201ENST00000445539 400 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AC009963.4-201ENST00000448535 339 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 RPS26P41-201ENST00000450370 284 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK3Q00526 AZGP1P2-201ENST00000454506 345 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 AC110749.1-201ENST00000462007 357 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK3Q00526 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK3Q00526 RPEP1-201ENST00000504507 658 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 MTND6P2-201ENST00000512226 524 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK3Q00526 RNU6-491P-201ENST00000516099 110 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK3Q00526 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 AP001804.2-201ENST00000533932 910 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 HNRNPCP1-201ENST00000556181 766 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 AC074276.2-201ENST00000619891 348 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 AC021766.1-201ENST00000624404 741 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AL356094.1-201ENST00000624663 1212 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 AC137056.2-201ENST00000624055 1958 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK3Q00526 AP000432.2-201ENST00000624164 2048 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms