Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 EEF1B2P6-201ENST00000445713 673 ntBASIC3.61□□□□□ -1.83
RPL39P62891 AL031584.1-201ENST00000447169 754 ntBASIC3.61□□□□□ -1.83
RPL39P62891 AC105399.1-202ENST00000447303 205 ntBASIC3.61□□□□□ -1.83
RPL39P62891 EEF1B2P3-201ENST00000447718 678 ntBASIC3.61□□□□□ -1.83
RPL39P62891 AC093166.3-201ENST00000448785 303 ntBASIC3.61□□□□□ -1.83
RPL39P62891 LRRC37A14P-201ENST00000452297 462 ntBASIC3.61□□□□□ -1.83
RPL39P62891 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 RN7SKP46-201ENST00000515942 234 ntBASIC3.61□□□□□ -1.83
RPL39P62891 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.61□□□□□ -1.83
RPL39P62891 HNRNPRP2-201ENST00000528421 743 ntBASIC3.61□□□□□ -1.83
RPL39P62891 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC3.61□□□□□ -1.83
RPL39P62891 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.61□□□□□ -1.83
RPL39P62891 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 AP001496.3-201ENST00000580230 913 ntBASIC3.61□□□□□ -1.83
RPL39P62891 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.61□□□□□ -1.83
RPL39P62891 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 AC132068.1-201ENST00000623805 459 ntBASIC3.61□□□□□ -1.83
RPL39P62891 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.61□□□□□ -1.83
RPL39P62891 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.61□□□□□ -1.83
RPL39P62891 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.6□□□□□ -1.83
RPL39P62891 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 AC089998.1-201ENST00000548575 3141 ntBASIC3.6□□□□□ -1.83
RPL39P62891 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPL39P62891 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 AC007996.1-201ENST00000620414 2821 ntBASIC3.6□□□□□ -1.83
RPL39P62891 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
RPL39P62891 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPL39P62891 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPL39P62891 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 AC004386.1-201ENST00000393214 761 ntBASIC3.6□□□□□ -1.83
RPL39P62891 OR8V1P-201ENST00000395193 873 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC005522.1-201ENST00000395416 346 ntBASIC3.6□□□□□ -1.83
RPL39P62891 HMGN1P20-201ENST00000411849 300 ntBASIC3.6□□□□□ -1.83
RPL39P62891 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.6□□□□□ -1.83
RPL39P62891 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 RN7SL72P-201ENST00000460697 269 ntBASIC3.6□□□□□ -1.83
RPL39P62891 GYG1P1-201ENST00000460864 698 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC104339.1-201ENST00000465478 348 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 AC073073.1-201ENST00000493920 463 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC097173.1-201ENST00000505862 819 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.6□□□□□ -1.83
RPL39P62891 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 AC020937.1-201ENST00000519677 1013 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 CASP1P2-201ENST00000526830 1258 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
RPL39P62891 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 RBM22P1-201ENST00000578589 1214 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.6□□□□□ -1.83
RPL39P62891 AC005479.3-201ENST00000602790 431 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AL049840.6-202ENST00000603373 279 ntBASIC3.6□□□□□ -1.83
RPL39P62891 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC3.6□□□□□ -1.83
RPL39P62891 AC008115.3-201ENST00000614874 549 ntBASIC3.6□□□□□ -1.83
RPL39P62891 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 MIR8069-1-201ENST00000616627 86 ntBASIC3.6□□□□□ -1.83
RPL39P62891 MIR8069-2-201ENST00000621412 86 ntBASIC3.6□□□□□ -1.83
RPL39P62891 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 AC097063.1-201ENST00000426714 1797 ntBASIC3.6□□□□□ -1.83
RPL39P62891 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPL39P62891 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPL39P62891 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.6□□□□□ -1.83
RPL39P62891 AC106872.5-201ENST00000508856 1416 ntBASIC3.6□□□□□ -1.83
RPL39P62891 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPL39P62891 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.6□□□□□ -1.83
RPL39P62891 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.59□□□□□ -1.83
RPL39P62891 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms