Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC016739.1-201ENST00000405359 345 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 GAS5-202ENST00000414075 413 ntTSL 2 BASIC3.84□□□□□ -1.79
CKS1BP61024 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 OR2X1P-201ENST00000421144 687 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 RPL36AP10-201ENST00000421785 322 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.84□□□□□ -1.79
CKS1BP61024 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 BMS1P10-201ENST00000443754 1120 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC022431.1-201ENST00000450941 438 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 RPL36AP55-201ENST00000454114 305 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 AC004129.2-201ENST00000457229 287 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 NXT1P1-201ENST00000458481 316 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC3.84□□□□□ -1.79
CKS1BP61024 OR7E22P-201ENST00000478335 1035 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 RN7SL727P-201ENST00000482164 296 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 RPS7P6-201ENST00000485777 579 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 AC018639.1-201ENST00000492994 442 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 MAST4-IT1-201ENST00000514241 658 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 FAU-203ENST00000525297 355 ntTSL 5 BASIC3.84□□□□□ -1.79
CKS1BP61024 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC3.84□□□□□ -1.79
CKS1BP61024 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 MRPS21P8-201ENST00000569196 235 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 AC007346.1-201ENST00000569208 867 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 RN7SL230P-201ENST00000580835 303 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC3.84□□□□□ -1.79
CKS1BP61024 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 RPL26P30-202ENST00000602923 645 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 AC073389.3-201ENST00000609434 935 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC091932.2-201ENST00000623014 291 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 MIR6715B-201ENST00000637172 77 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 ATM-229ENST00000639953 587 ntTSL 5 BASIC3.84□□□□□ -1.79
CKS1BP61024 EEF1A1P33-201ENST00000554413 1362 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.8
CKS1BP61024 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CKS1BP61024 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC3.84□□□□□ -1.8
CKS1BP61024 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CKS1BP61024 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CKS1BP61024 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
CKS1BP61024 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CKS1BP61024 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CKS1BP61024 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CKS1BP61024 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.83□□□□□ -1.8
CKS1BP61024 OR4F13P-202ENST00000560066 2054 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CKS1BP61024 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CKS1BP61024 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.83□□□□□ -1.8
CKS1BP61024 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CKS1BP61024 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CKS1BP61024 SELENOWP1-201ENST00000322792 252 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CKS1BP61024 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CKS1BP61024 RNU6-1263P-201ENST00000384601 106 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CKS1BP61024 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 CDY17P-201ENST00000414121 1282 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 RNF10P1-201ENST00000418589 369 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.83□□□□□ -1.8
CKS1BP61024 CDY8P-201ENST00000428380 1279 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.83□□□□□ -1.8
CKS1BP61024 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC3.83□□□□□ -1.8
CKS1BP61024 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 AP000936.3-201ENST00000438127 255 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC3.83□□□□□ -1.8
CKS1BP61024 LINC02210-201ENST00000444561 288 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CKS1BP61024 CDY20P-201ENST00000447528 1279 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 SNORD125-201ENST00000459538 96 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 RPS7P10-201ENST00000464254 603 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 ATP5LP5-201ENST00000483050 299 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 AC122714.1-201ENST00000502510 459 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 ZNF519P4-201ENST00000514008 125 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 PRMT5P1-201ENST00000514351 598 ntBASIC3.83□□□□□ -1.8
CKS1BP61024 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC3.83□□□□□ -1.8
CKS1BP61024 AC090281.1-201ENST00000523019 276 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms