Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 GCNT1P4-201ENST00000404096 329 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 SSR1P1-201ENST00000407630 814 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 RNA5SP231-201ENST00000410496 138 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 Z68694.1-201ENST00000413929 841 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.93□□□□□ -1.78
FOXA3P55318 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
FOXA3P55318 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 NPM1P33-201ENST00000438918 872 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AL450263.2-201ENST00000439400 589 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXA3P55318 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 RBMY2AP-201ENST00000445405 1157 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXA3P55318 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC3.93□□□□□ -1.78
FOXA3P55318 RPL7L1P1-201ENST00000448259 785 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 RBMY2CP-201ENST00000448575 1157 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 RBMY2DP-202ENST00000448881 1157 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AL591363.1-201ENST00000450091 483 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 RBMY2BP-202ENST00000451071 1156 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 AC108161.1-201ENST00000461060 402 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
FOXA3P55318 AC092754.1-201ENST00000472975 479 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AC090686.1-201ENST00000481577 749 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AC022215.1-201ENST00000481770 362 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AC073358.1-201ENST00000505671 684 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 CETN3-206ENST00000522864 738 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXA3P55318 EIF4A2P5-201ENST00000529914 499 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 OLR1-209ENST00000543993 822 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXA3P55318 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXA3P55318 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXA3P55318 AC009597.2-201ENST00000604659 592 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AL512413.1-201ENST00000606489 382 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXA3P55318 AL121890.2-201ENST00000617644 465 ntBASIC3.93□□□□□ -1.78
FOXA3P55318 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
FOXA3P55318 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXA3P55318 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXA3P55318 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXA3P55318 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXA3P55318 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXA3P55318 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXA3P55318 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXA3P55318 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXA3P55318 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXA3P55318 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXA3P55318 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
FOXA3P55318 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
FOXA3P55318 RNA5SP131-201ENST00000365452 119 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXA3P55318 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXA3P55318 BX323845.3-201ENST00000428215 527 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 AL022324.2-201ENST00000434827 780 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXA3P55318 TMX2P1-201ENST00000436507 708 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 ARAFP2-201ENST00000440565 559 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 ATP5LP2-201ENST00000440646 311 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 RPL6P30-201ENST00000443382 862 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXA3P55318 RPL5P7-201ENST00000444235 813 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 AC007383.1-201ENST00000445875 636 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 GAS5-218ENST00000448718 565 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXA3P55318 CST12P-201ENST00000457644 362 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 CYCSP34-201ENST00000458172 304 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXA3P55318 AC112206.1-201ENST00000468416 477 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 RPS27P20-201ENST00000492051 246 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 RN7SL362P-201ENST00000494228 267 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 AC106822.1-201ENST00000502647 526 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 AC112484.3-201ENST00000505910 329 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXA3P55318 RNA5SP340-201ENST00000517132 107 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXA3P55318 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXA3P55318 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXA3P55318 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXA3P55318 AC097505.1-201ENST00000610199 565 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXA3P55318 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC3.92□□□□□ -1.78
FOXA3P55318 RBPJP2-201ENST00000618187 1444 ntBASIC3.92□□□□□ -1.78
FOXA3P55318 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXA3P55318 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXA3P55318 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXA3P55318 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXA3P55318 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXA3P55318 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
FOXA3P55318 NEPNP-201ENST00000404786 1371 ntBASIC3.91□□□□□ -1.78
FOXA3P55318 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXA3P55318 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
FOXA3P55318 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXA3P55318 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXA3P55318 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
FOXA3P55318 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXA3P55318 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms