Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC008115.3-201ENST00000614874 549 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AC091305.2-201ENST00000624049 1576 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 HSPA8P14-201ENST00000552265 1805 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CR1P49238 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CX3CR1P49238 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 RN7SKP28-201ENST00000364770 305 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 SLC20A1P1-201ENST00000413906 956 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 AC093155.2-201ENST00000420734 937 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 RPL24P2-201ENST00000421023 475 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 SETP10-201ENST00000424368 814 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CR1P49238 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CR1P49238 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CR1P49238 NFYAP1-201ENST00000431953 972 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 FMO7P-201ENST00000436045 768 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CR1P49238 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.75□□□□□ -1.65
CX3CR1P49238 LDHBP2-201ENST00000456969 1005 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 RN7SL72P-201ENST00000460697 269 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CR1P49238 AP001960.1-201ENST00000506494 658 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 RN7SKP34-201ENST00000516142 244 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 RN7SKP99-201ENST00000517028 307 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 TMEM97P2-201ENST00000517841 403 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CR1P49238 AC130364.2-201ENST00000528639 604 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 NANOGNBP2-201ENST00000544753 553 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 LSM3P2-201ENST00000551246 273 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 OR11H3P-201ENST00000554547 982 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CR1P49238 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CR1P49238 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CR1P49238 AC100767.2-201ENST00000604840 693 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 Z95327.3-201ENST00000610385 572 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 AL118522.2-201ENST00000616045 615 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 AC074140.1-201ENST00000621617 208 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 AC135068.5-201ENST00000624197 983 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 MTCO1P15-201ENST00000529569 1526 ntBASIC4.75□□□□□ -1.65
CX3CR1P49238 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CR1P49238 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
CX3CR1P49238 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 OR13C1P-202ENST00000641378 2919 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AL078621.3-201ENST00000623707 2042 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CX3CR1P49238 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 RNA5SP46-201ENST00000362370 120 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 RNU4-2-201ENST00000365668 141 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 RNA5SP241-201ENST00000391326 114 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.74□□□□□ -1.65
CX3CR1P49238 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.74□□□□□ -1.65
CX3CR1P49238 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 NDUFA5P5-201ENST00000468361 342 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms