Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
HOXA9P31269 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXA9P31269 FABP7P2-201ENST00000429946 379 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 DNAJB5P1-201ENST00000454004 806 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 AC009127.1-201ENST00000467090 155 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 AC092754.1-201ENST00000472975 479 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 GTF2F2P1-201ENST00000511083 675 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 EIF3KP3-201ENST00000514461 639 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 GAPDHP62-201ENST00000515313 990 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 RN7SKP147-201ENST00000517154 244 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 AC134349.2-201ENST00000535136 910 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 AC068870.1-201ENST00000563737 2455 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 AC232271.1-201ENST00000602455 2715 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 MIR6748-201ENST00000610433 71 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 AL445528.2-201ENST00000620582 470 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.61□□□□□ -1.51
HOXA9P31269 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA9P31269 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA9P31269 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
HOXA9P31269 THAP12P4-201ENST00000528321 2266 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA9P31269 PROS2P-201ENST00000474651 1951 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HOXA9P31269 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA9P31269 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA9P31269 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA9P31269 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA9P31269 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA9P31269 RNU1-146P-201ENST00000364015 165 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA9P31269 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXA9P31269 U3.23-201ENST00000391132 200 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 AL078599.1-201ENST00000402075 293 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA9P31269 RBMY2QP-201ENST00000429799 1147 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 AC006466.1-201ENST00000438721 289 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 AC073648.4-201ENST00000442655 781 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 RN7SL423P-201ENST00000486202 304 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA9P31269 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXA9P31269 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA9P31269 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA9P31269 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA9P31269 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA9P31269 AC005252.1-201ENST00000604518 1063 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 AC009597.2-201ENST00000604659 592 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 MIR6820-201ENST00000611508 62 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HOXA9P31269 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA9P31269 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HOXA9P31269 AC083899.1-201ENST00000454465 3819 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 NLRP3P1-201ENST00000622303 1785 ntBASIC5.6□□□□□ -1.51
HOXA9P31269 AC068870.3-201ENST00000625077 2536 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXA9P31269 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA9P31269 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms