Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SHC1P29353 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 RN7SKP6-201ENST00000364795 319 ntBASIC4.96□□□□□ -1.62
SHC1P29353 AL050305.1-201ENST00000399993 1230 ntBASIC4.96□□□□□ -1.62
SHC1P29353 AL391422.1-201ENST00000402155 436 ntBASIC4.96□□□□□ -1.62
SHC1P29353 RN7SKP206-201ENST00000410823 293 ntBASIC4.96□□□□□ -1.62
SHC1P29353 REREP1Y-201ENST00000422655 198 ntBASIC4.96□□□□□ -1.62
SHC1P29353 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.96□□□□□ -1.62
SHC1P29353 RPL7P56-201ENST00000429441 717 ntBASIC4.96□□□□□ -1.62
SHC1P29353 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.96□□□□□ -1.62
SHC1P29353 REREP2Y-201ENST00000439103 200 ntBASIC4.96□□□□□ -1.62
SHC1P29353 AC073465.2-201ENST00000440938 498 ntBASIC4.96□□□□□ -1.62
SHC1P29353 GAPDHP14-201ENST00000450472 937 ntBASIC4.96□□□□□ -1.62
SHC1P29353 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.96□□□□□ -1.62
SHC1P29353 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.96□□□□□ -1.62
SHC1P29353 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 RN7SL184P-201ENST00000488308 297 ntBASIC4.96□□□□□ -1.62
SHC1P29353 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 AC106872.4-201ENST00000510050 523 ntBASIC4.96□□□□□ -1.62
SHC1P29353 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.96□□□□□ -1.62
SHC1P29353 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.96□□□□□ -1.62
SHC1P29353 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.96□□□□□ -1.62
SHC1P29353 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SHC1P29353 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.96□□□□□ -1.62
SHC1P29353 MIR4433B-201ENST00000581329 102 ntBASIC4.96□□□□□ -1.62
SHC1P29353 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 AL354696.1-201ENST00000614652 497 ntBASIC4.96□□□□□ -1.62
SHC1P29353 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.96□□□□□ -1.62
SHC1P29353 AL049767.1-202ENST00000637826 242 ntBASIC4.96□□□□□ -1.62
SHC1P29353 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.96□□□□□ -1.62
SHC1P29353 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SHC1P29353 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SHC1P29353 AL353796.1-201ENST00000561542 3241 ntBASIC4.96□□□□□ -1.62
SHC1P29353 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHC1P29353 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.96□□□□□ -1.62
SHC1P29353 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
SHC1P29353 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SHC1P29353 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 AC068870.3-201ENST00000625077 2536 ntBASIC4.95□□□□□ -1.62
SHC1P29353 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 LINC01963-201ENST00000562038 3148 ntBASIC4.95□□□□□ -1.62
SHC1P29353 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 AC012078.1-201ENST00000405035 1646 ntBASIC4.95□□□□□ -1.62
SHC1P29353 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SHC1P29353 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 RNU4-2-201ENST00000365668 141 ntBASIC4.95□□□□□ -1.62
SHC1P29353 MIR551A-201ENST00000385042 96 ntBASIC4.95□□□□□ -1.62
SHC1P29353 NACAP7-201ENST00000407371 609 ntBASIC4.95□□□□□ -1.62
SHC1P29353 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.95□□□□□ -1.62
SHC1P29353 AC079355.1-201ENST00000421770 223 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.95□□□□□ -1.62
SHC1P29353 TRIM60P13-201ENST00000432350 1283 ntBASIC4.95□□□□□ -1.62
SHC1P29353 PSAT1P4-201ENST00000466500 526 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AP000926.3-201ENST00000497201 299 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AC090638.1-201ENST00000498296 909 ntBASIC4.95□□□□□ -1.62
SHC1P29353 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.95□□□□□ -1.62
SHC1P29353 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.95□□□□□ -1.62
SHC1P29353 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.95□□□□□ -1.62
SHC1P29353 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.95□□□□□ -1.62
SHC1P29353 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.95□□□□□ -1.62
SHC1P29353 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SHC1P29353 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.95□□□□□ -1.62
SHC1P29353 AC015720.2-201ENST00000567709 334 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SHC1P29353 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.95□□□□□ -1.62
SHC1P29353 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.95□□□□□ -1.62
SHC1P29353 AC009237.13-201ENST00000603193 276 ntBASIC4.95□□□□□ -1.62
SHC1P29353 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AC026790.2-201ENST00000606282 430 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AC008833.1-201ENST00000611633 691 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AC016911.1-201ENST00000613297 452 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AL359513.1-201ENST00000614364 557 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AC073592.7-201ENST00000623659 507 ntBASIC4.95□□□□□ -1.62
SHC1P29353 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.95□□□□□ -1.62
SHC1P29353 AL355480.1-201ENST00000629041 99 ntBASIC4.95□□□□□ -1.62
SHC1P29353 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SHC1P29353 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SHC1P29353 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SHC1P29353 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHC1P29353 AL603750.1-201ENST00000624216 1717 ntBASIC4.94□□□□□ -1.62
SHC1P29353 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms