Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 AC009237.13-201ENST00000603193 276 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AC009237.12-201ENST00000604755 742 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AC009779.8-202ENST00000607990 932 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.74□□□□□ -1.17
RFX1P22670 AC007684.1-201ENST00000609671 477 ntBASIC7.74□□□□□ -1.17
RFX1P22670 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 AC016717.3-201ENST00000624730 554 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AL355480.1-201ENST00000629041 99 ntBASIC7.74□□□□□ -1.17
RFX1P22670 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 AC183089.2-201ENST00000637931 916 ntBASIC7.74□□□□□ -1.17
RFX1P22670 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 AC138915.4-201ENST00000565549 4147 ntBASIC7.73□□□□□ -1.17
RFX1P22670 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 AC079949.2-201ENST00000617117 2933 ntBASIC7.73□□□□□ -1.17
RFX1P22670 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.73□□□□□ -1.17
RFX1P22670 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 AC004520.1-201ENST00000608362 1413 ntBASIC7.73□□□□□ -1.17
RFX1P22670 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RFX1P22670 RN7SKP107-201ENST00000364157 290 ntBASIC7.73□□□□□ -1.17
RFX1P22670 RN7SKP118-201ENST00000364331 330 ntBASIC7.73□□□□□ -1.17
RFX1P22670 SNORA51.12-201ENST00000384448 134 ntBASIC7.73□□□□□ -1.17
RFX1P22670 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RFX1P22670 AC068533.2-201ENST00000411872 306 ntBASIC7.73□□□□□ -1.17
RFX1P22670 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.73□□□□□ -1.17
RFX1P22670 Z82198.3-201ENST00000421145 199 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AL672212.1-201ENST00000422246 400 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AC104651.1-201ENST00000427559 735 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AL139415.2-201ENST00000431968 163 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AL022324.2-201ENST00000434827 780 ntBASIC7.73□□□□□ -1.17
RFX1P22670 RPL23AP19-201ENST00000436229 369 ntBASIC7.73□□□□□ -1.17
RFX1P22670 CYCSP11-201ENST00000436426 315 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.73□□□□□ -1.17
RFX1P22670 AL034399.1-201ENST00000451535 380 ntBASIC7.73□□□□□ -1.17
RFX1P22670 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.73□□□□□ -1.17
RFX1P22670 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC7.73□□□□□ -1.17
RFX1P22670 RPSAP7-201ENST00000456871 885 ntBASIC7.73□□□□□ -1.17
RFX1P22670 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.73□□□□□ -1.17
RFX1P22670 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.73□□□□□ -1.17
RFX1P22670 AC026826.1-201ENST00000493002 361 ntBASIC7.73□□□□□ -1.17
RFX1P22670 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.73□□□□□ -1.17
RFX1P22670 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.73□□□□□ -1.17
RFX1P22670 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
RFX1P22670 AC008549.1-201ENST00000512900 643 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.73□□□□□ -1.17
RFX1P22670 AC138517.1-201ENST00000515724 568 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AC008802.1-201ENST00000519121 791 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.73□□□□□ -1.17
RFX1P22670 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.73□□□□□ -1.17
RFX1P22670 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.73□□□□□ -1.17
RFX1P22670 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7.73□□□□□ -1.17
RFX1P22670 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 RPSAP66-201ENST00000592196 606 ntBASIC7.73□□□□□ -1.17
RFX1P22670 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.73□□□□□ -1.17
RFX1P22670 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.73□□□□□ -1.17
RFX1P22670 AC018926.3-201ENST00000618841 406 ntBASIC7.73□□□□□ -1.17
RFX1P22670 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 LINC01739-205ENST00000641890 573 ntBASIC7.73□□□□□ -1.17
RFX1P22670 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.73□□□□□ -1.17
RFX1P22670 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 CDC27P2-201ENST00000425026 1922 ntBASIC7.73□□□□□ -1.17
RFX1P22670 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RFX1P22670 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 Z93929.1-201ENST00000418200 1475 ntBASIC7.73□□□□□ -1.17
RFX1P22670 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RFX1P22670 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RFX1P22670 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms