Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC090651.1-201ENST00000567865 634 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC134669.1-201ENST00000581275 672 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC068790.6-201ENST00000602558 258 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC114477.1-201ENST00000605097 605 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AL021368.3-201ENST00000607119 578 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 AL008723.3-201ENST00000608926 449 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AL158163.2-201ENST00000619110 700 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC010435.1-201ENST00000623353 1177 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC018628.1-201ENST00000624147 3819 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC024023.1-201ENST00000624530 922 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC116667.2-201ENST00000641075 823 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
COL6A2P12110 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.32□□□□□ -1.4
COL6A2P12110 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.32□□□□□ -1.4
COL6A2P12110 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 AC027279.4-201ENST00000624371 2072 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.32□□□□□ -1.4
COL6A2P12110 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.31□□□□□ -1.4
COL6A2P12110 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
COL6A2P12110 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL6A2P12110 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 Y_RNA.194-201ENST00000363985 102 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 RNU4-4P-201ENST00000364588 130 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 RNU1-59P-201ENST00000364829 162 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AL034403.1-201ENST00000399414 885 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 FDPSP5-201ENST00000399474 1057 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AL451061.1-201ENST00000407887 862 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AL139100.1-201ENST00000408001 498 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 MOB1AP1-201ENST00000430903 535 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 PRELID3BP10-201ENST00000431957 584 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 RPSAP32-201ENST00000432681 526 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 PA2G4P6-201ENST00000438325 1197 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 AL138878.2-201ENST00000440581 1241 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC022080.2-201ENST00000452932 533 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.31□□□□□ -1.4
COL6A2P12110 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.31□□□□□ -1.4
COL6A2P12110 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.31□□□□□ -1.4
COL6A2P12110 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC008494.2-201ENST00000514544 370 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 RNU6-232P-201ENST00000517144 64 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.31□□□□□ -1.4
COL6A2P12110 AP001804.2-201ENST00000533932 910 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC026956.1-201ENST00000558741 396 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 AC090616.2-202ENST00000584248 222 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 AL590229.1-201ENST00000603497 542 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AL078624.2-201ENST00000605063 554 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AC012557.1-201ENST00000607115 611 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 MIR8082-201ENST00000612488 81 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 U1.25-201ENST00000614085 162 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 MIR6883-201ENST00000614952 78 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms