Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ZNF969P-201ENST00000510345 2341 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SPTA1P02549 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 SNORA17.1-201ENST00000362945 126 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 CDC27P1-201ENST00000445384 715 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AC068522.1-201ENST00000482895 345 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.91□□□□□ -1.62
SPTA1P02549 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.91□□□□□ -1.62
SPTA1P02549 RN7SKP253-201ENST00000516424 309 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 KCTD9P4-201ENST00000526766 1166 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AL121594.2-201ENST00000541658 472 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 AC010857.1-201ENST00000606398 594 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.91□□□□□ -1.62
SPTA1P02549 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 NXF4-202ENST00000416098 1465 ntBASIC4.9□□□□□ -1.62
SPTA1P02549 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SPTA1P02549 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
SPTA1P02549 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SPTA1P02549 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SPTA1P02549 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SPTA1P02549 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SPTA1P02549 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SPTA1P02549 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SPTA1P02549 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.9□□□□□ -1.62
SPTA1P02549 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.9□□□□□ -1.62
SPTA1P02549 PPIAP21-201ENST00000464473 501 ntBASIC4.9□□□□□ -1.62
SPTA1P02549 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.9□□□□□ -1.62
SPTA1P02549 RPL7P16-201ENST00000479738 738 ntBASIC4.9□□□□□ -1.62
SPTA1P02549 NIP7P2-201ENST00000485801 544 ntBASIC4.9□□□□□ -1.62
SPTA1P02549 AC020890.1-201ENST00000491837 504 ntBASIC4.9□□□□□ -1.62
SPTA1P02549 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.9□□□□□ -1.62
SPTA1P02549 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.9□□□□□ -1.62
SPTA1P02549 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.9□□□□□ -1.62
SPTA1P02549 AL163952.1-202ENST00000569625 600 ntBASIC4.9□□□□□ -1.62
SPTA1P02549 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC4.9□□□□□ -1.62
SPTA1P02549 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.9□□□□□ -1.63
SPTA1P02549 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SPTA1P02549 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.9□□□□□ -1.63
SPTA1P02549 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SPTA1P02549 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SPTA1P02549 AP002991.2-201ENST00000623807 2801 ntBASIC4.9□□□□□ -1.63
SPTA1P02549 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SPTA1P02549 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SPTA1P02549 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SPTA1P02549 AC027279.1-201ENST00000568885 4284 ntBASIC4.9□□□□□ -1.63
SPTA1P02549 ZNF658B-201ENST00000602828 3408 ntBASIC4.9□□□□□ -1.63
SPTA1P02549 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SPTA1P02549 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SPTA1P02549 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SPTA1P02549 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 DDX39BP1-205ENST00000422507 192 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 RPL12P17-201ENST00000432393 498 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.89□□□□□ -1.63
SPTA1P02549 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.89□□□□□ -1.63
SPTA1P02549 TXNP2-201ENST00000443918 295 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 CYCSP42-201ENST00000450823 238 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SPTA1P02549 RPS4XP20-201ENST00000505751 772 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 SAP18P1-201ENST00000512058 390 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 AL109766.1-201ENST00000555080 552 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 AC091042.1-201ENST00000579213 173 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 AC005377.1-201ENST00000605126 456 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 AL161637.1-201ENST00000622380 412 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SPTA1P02549 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.89□□□□□ -1.63
SPTA1P02549 RN7SKP126-201ENST00000411143 300 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.89□□□□□ -1.63
SPTA1P02549 AC016027.5-201ENST00000427227 210 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 AK3P5-201ENST00000432033 519 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 snoU13.20-201ENST00000459180 104 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 MED28P5-201ENST00000528254 438 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.89□□□□□ -1.63
SPTA1P02549 AL121834.1-201ENST00000572284 509 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 AL512782.1-201ENST00000603093 364 ntBASIC4.89□□□□□ -1.63
SPTA1P02549 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.89□□□□□ -1.63
SPTA1P02549 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SPTA1P02549 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms