Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC008627.1-201ENST00000517511 1704 ntBASIC5.23□□□□□ -1.57
CLPTM1O96005 MTCO1P28-201ENST00000574177 1528 ntBASIC5.23□□□□□ -1.57
CLPTM1O96005 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLPTM1O96005 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLPTM1O96005 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AL022393.1-201ENST00000625142 1677 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 RNF19BPY-201ENST00000458209 1550 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLPTM1O96005 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLPTM1O96005 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC004386.1-201ENST00000393214 761 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 VDAC2P1-201ENST00000399358 958 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 RPS12P17-201ENST00000438591 377 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 PCNPP2-201ENST00000441651 455 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 FTLP8-201ENST00000446770 267 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 PPIAP27-201ENST00000453800 265 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC093890.1-201ENST00000502554 540 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 EIF3KP3-201ENST00000514461 639 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 RPS27AP18-201ENST00000515536 459 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 RN7SKP70-201ENST00000516655 271 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC139697.1-201ENST00000548429 745 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AC079905.1-201ENST00000549280 475 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.22□□□□□ -1.57
CLPTM1O96005 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC006349.1-201ENST00000555526 235 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 DHFRP1-201ENST00000579682 559 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC007423.1-201ENST00000605009 627 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC096861.1-201ENST00000616652 240 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 AP001005.3-201ENST00000622049 129 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 AL672167.1-204ENST00000641875 3017 ntBASIC5.22□□□□□ -1.57
CLPTM1O96005 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.22□□□□□ -1.57
CLPTM1O96005 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.22□□□□□ -1.57
CLPTM1O96005 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLPTM1O96005 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLPTM1O96005 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.21□□□□□ -1.57
CLPTM1O96005 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.21□□□□□ -1.58
CLPTM1O96005 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLPTM1O96005 RNA5SP326-201ENST00000363209 110 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 UBBP2-201ENST00000376781 231 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AL607077.1-201ENST00000401718 499 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AL359643.1-201ENST00000404109 423 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 RN7SKP240-201ENST00000410583 375 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 RNU2-72P-201ENST00000411175 163 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 PCNPP4-201ENST00000414817 517 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 RNF10P1-201ENST00000418589 369 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 RPS6P14-201ENST00000425165 719 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.21□□□□□ -1.58
CLPTM1O96005 BMS1P10-201ENST00000443754 1120 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AC016772.1-201ENST00000444170 1261 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms