Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.19□□□□□ -1.1
RIMBP3Q9UFD9 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.19□□□□□ -1.1
RIMBP3Q9UFD9 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RIMBP3Q9UFD9 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RIMBP3Q9UFD9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.19□□□□□ -1.1
RIMBP3Q9UFD9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
RIMBP3Q9UFD9 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RIMBP3Q9UFD9 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 SCARNA22-201ENST00000503991 125 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AC099676.1-201ENST00000608886 657 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AL356863.1-201ENST00000623378 1080 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 ACTR3BP5-201ENST00000448440 1479 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 OR4K17-201ENST00000315543 1032 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 SNORA63.1-201ENST00000362493 131 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 MIR554-201ENST00000384874 96 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 RPL23AP17-201ENST00000401064 499 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 RPS3AP25-201ENST00000411660 793 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 FABP7P1-201ENST00000424004 391 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 OR2B7P-201ENST00000429302 934 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AC106806.2-201ENST00000509365 500 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 MIR2116-201ENST00000517221 80 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AC011497.2-201ENST00000600255 639 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AL160281.1-201ENST00000605307 311 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 AC114781.5-201ENST00000615297 108 ntBASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RIMBP3Q9UFD9 ZFRP1-201ENST00000457579 2970 ntBASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 AC112243.1-201ENST00000623949 3851 ntBASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 AL353763.1-201ENST00000624467 1628 ntBASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 AC022819.1-201ENST00000563495 3910 ntBASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 SLC25A18P1-201ENST00000449385 454 ntBASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 RN7SL339P-201ENST00000580597 296 ntBASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 AC130448.2-201ENST00000624082 374 ntBASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIMBP3Q9UFD9 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 SPATA31C1-201ENST00000420021 3895 ntBASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 ZNF652P1-201ENST00000442420 1309 ntBASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 SNORA62.3-201ENST00000365110 153 ntBASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 GLUD1P3-202ENST00000508551 200 ntBASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 CR381572.2-201ENST00000624852 397 ntBASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 AC004158.1-201ENST00000564508 4319 ntBASIC8.16□□□□□ -1.1
RIMBP3Q9UFD9 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 AC032011.1-201ENST00000611703 1549 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 AL121657.1-201ENST00000327215 531 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RNA5SP317-201ENST00000410176 116 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RNA5SP311-201ENST00000411290 116 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 CYCSP19-201ENST00000411715 316 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 BX323845.1-201ENST00000432417 179 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RPS29P10-201ENST00000439197 166 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RN7SL244P-201ENST00000493405 297 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RPS17P5-201ENST00000498293 408 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 AC010350.1-201ENST00000504908 231 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RNA5SP315-201ENST00000516340 116 ntBASIC8.15□□□□□ -1.1
RIMBP3Q9UFD9 RNA5SP312-201ENST00000517068 116 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms