Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 MRPS21P9-201ENST00000571150 257 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 RN7SL66P-201ENST00000582099 264 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 RPL29P33-201ENST00000587474 316 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 SLC25A36P1-201ENST00000590111 465 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 EIF1P6-201ENST00000600054 334 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AP001267.4-201ENST00000602598 545 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC069545.1-201ENST00000605671 358 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC068276.1-201ENST00000605793 379 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC010857.1-201ENST00000606398 594 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC012360.2-201ENST00000609349 391 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC004948.1-201ENST00000609858 672 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AL136981.2-201ENST00000617319 734 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC048341.3-201ENST00000619323 491 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC019072.1-201ENST00000604535 1551 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC096992.2-201ENST00000609553 1684 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 RNA5SP321-201ENST00000362722 111 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 RNU1-55P-201ENST00000365510 158 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 MTCO3P31-201ENST00000405526 789 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AL034379.1-201ENST00000423216 253 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 CYCSP46-201ENST00000423569 204 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC098614.3-201ENST00000438957 440 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC122718.1-201ENST00000439448 744 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 RNA5SP269-201ENST00000459032 137 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 RN7SL834P-201ENST00000461450 286 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 RN7SL393P-201ENST00000463588 296 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 FAM133DP-201ENST00000464802 691 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 RPL34P33-201ENST00000486062 334 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 ARL2BPP4-201ENST00000506854 471 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC091849.1-201ENST00000509920 121 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AP001207.1-201ENST00000524051 481 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC005519.1-201ENST00000554490 601 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 RBM22P12-201ENST00000567098 1255 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 MIR3157-201ENST00000578688 85 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC091133.5-201ENST00000603088 301 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC103881.1-201ENST00000603476 538 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC004067.1-201ENST00000608733 700 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 AP000238.1-201ENST00000608759 426 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTN3Q9P232 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTN3Q9P232 AC090181.3-201ENST00000624777 1514 ntBASIC7.31□□□□□ -1.24
CNTN3Q9P232 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms