Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RPL7P6-201ENST00000480903 738 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 DEFB109A-201ENST00000482450 265 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 RN7SL547P-201ENST00000490793 290 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 RN7SL447P-201ENST00000494711 245 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 AC126177.5-201ENST00000549599 178 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 RPL10P14-201ENST00000565265 298 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 AC022884.2-201ENST00000578535 580 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 MIR4660-201ENST00000583549 74 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 AL357153.4-201ENST00000620487 1016 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 AP001962.1-201ENST00000624114 559 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 SNORA17.5-201ENST00000630429 132 ntBASIC5.29□□□□□ -1.56
TREX1Q9NSU2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TREX1Q9NSU2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 SMG1P7-201ENST00000565246 2704 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC007618.1-201ENST00000366455 732 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 HSPA8P15-201ENST00000401676 786 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 RNA5SP178-201ENST00000410380 128 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC046176.1-201ENST00000435260 1170 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 CYCSP12-201ENST00000437729 300 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC108161.1-201ENST00000461060 402 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC006427.1-201ENST00000514359 712 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC021733.2-201ENST00000518830 497 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 RN7SL708P-201ENST00000580952 299 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AL589674.2-201ENST00000604304 337 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AL359513.1-201ENST00000614364 557 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC007204.2-201ENST00000615022 616 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 WBP1LP8-201ENST00000617401 327 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 FRG1EP-201ENST00000634469 770 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 OR55B1P-203ENST00000641518 2602 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 TRIM51GP-201ENST00000534741 1350 ntBASIC5.28□□□□□ -1.56
TREX1Q9NSU2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TREX1Q9NSU2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AC022417.1-201ENST00000624768 1303 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 RNU1-77P-201ENST00000390868 162 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 RPS26P41-201ENST00000450370 284 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 RN7SL717P-201ENST00000478343 297 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 RN7SL184P-201ENST00000488308 297 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AL049874.2-201ENST00000492636 288 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 LDHBP3-201ENST00000514909 822 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 SNORA70.11-201ENST00000515987 138 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 SNORA70.13-201ENST00000516116 138 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 RNU6-941P-201ENST00000516346 108 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 SNORD95-201ENST00000579879 68 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms