Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.34□□□□□ -1.72
VGLL1Q99990 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
VGLL1Q99990 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VGLL1Q99990 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
VGLL1Q99990 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VGLL1Q99990 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.34□□□□□ -1.72
VGLL1Q99990 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 CUL4AP1-201ENST00000514750 1863 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC008627.1-201ENST00000517511 1704 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AL132656.3-201ENST00000606384 1595 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC092376.2-201ENST00000622621 4116 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 CASC19-248ENST00000641674 1356 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC117409.1-201ENST00000470499 1310 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 RNU6-792P-201ENST00000363490 107 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 RNU6-1257P-201ENST00000384625 110 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC069282.1-201ENST00000411911 526 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 DEFA9P-201ENST00000433042 285 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 SUMO2P1-206ENST00000445436 284 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC023271.1-201ENST00000445936 1090 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 RN7SL254P-201ENST00000460609 284 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 CABYRP1-201ENST00000465493 1045 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC092865.4-201ENST00000477936 615 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 RPS7P6-201ENST00000485777 579 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.33□□□□□ -1.72
VGLL1Q99990 GUSBP9-201ENST00000510138 584 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 SNORA76.2-201ENST00000517095 137 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 OR8A2P-201ENST00000528631 952 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AP003033.2-201ENST00000528901 805 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.33□□□□□ -1.72
VGLL1Q99990 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.33□□□□□ -1.72
VGLL1Q99990 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 MIR744-201ENST00000578242 98 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AP005119.1-201ENST00000580956 292 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC008507.3-201ENST00000585753 472 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.33□□□□□ -1.72
VGLL1Q99990 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 BNIP3P38-201ENST00000601117 544 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC068768.2-201ENST00000602352 343 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC025016.1-201ENST00000616746 682 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 FAM27E2-201ENST00000619668 403 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AC079298.2-201ENST00000623885 459 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC004808.1-201ENST00000627671 721 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.33□□□□□ -1.72
VGLL1Q99990 AL357140.4-201ENST00000636827 412 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 AC099654.8-201ENST00000637757 681 ntBASIC4.33□□□□□ -1.72
VGLL1Q99990 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VGLL1Q99990 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VGLL1Q99990 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VGLL1Q99990 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VGLL1Q99990 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VGLL1Q99990 AC083899.1-201ENST00000454465 3819 ntBASIC4.32□□□□□ -1.72
VGLL1Q99990 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VGLL1Q99990 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.32□□□□□ -1.72
VGLL1Q99990 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VGLL1Q99990 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VGLL1Q99990 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VGLL1Q99990 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
VGLL1Q99990 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VGLL1Q99990 AL929601.4-201ENST00000613011 1341 ntBASIC4.32□□□□□ -1.72
VGLL1Q99990 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VGLL1Q99990 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VGLL1Q99990 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms