Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.61□□□□□ -1.51
RPRD1AQ96P16 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 ABCC13-202ENST00000463099 3842 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 MIR133B-201ENST00000362210 119 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 RPL35AP24-201ENST00000413846 330 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 RPEP1-201ENST00000504507 658 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 OR4A17P-201ENST00000526032 904 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 RBM22P1-201ENST00000578589 1214 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AP000769.2-201ENST00000602344 396 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 IMMP1LP3-201ENST00000604197 224 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC005618.4-201ENST00000625053 554 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC136428.4-201ENST00000634254 1155 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC073869.8-201ENST00000641806 335 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.6□□□□□ -1.51
RPRD1AQ96P16 AC093909.5-201ENST00000621839 1799 ntBASIC5.6□□□□□ -1.51
RPRD1AQ96P16 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 Z83820.1-201ENST00000456978 1499 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 RN7SKP185-201ENST00000362813 326 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AL390774.1-201ENST00000411924 246 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 GTF3AP1-201ENST00000416942 1004 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AL354868.1-201ENST00000417077 482 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 DSTNP5-201ENST00000427921 523 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 RPL7L1P9-201ENST00000431298 745 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 NPM1P48-201ENST00000436002 853 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC011225.1-201ENST00000457751 369 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 RPS26P39-201ENST00000469206 341 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC092754.1-201ENST00000472975 479 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 RPL7P39-201ENST00000481157 744 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC021106.1-201ENST00000509020 1058 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 SCARNA21.2-201ENST00000516600 166 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC136777.2-201ENST00000522979 358 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 HMGB1P40-201ENST00000525121 540 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AP004607.2-201ENST00000533949 322 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC005341.1-201ENST00000571086 708 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AL139124.1-201ENST00000609123 421 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AL122125.1-201ENST00000616999 600 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 AC021766.1-201ENST00000624404 741 ntBASIC5.59□□□□□ -1.51
RPRD1AQ96P16 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
RPRD1AQ96P16 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.59□□□□□ -1.52
RPRD1AQ96P16 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.59□□□□□ -1.52
RPRD1AQ96P16 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RPRD1AQ96P16 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RPRD1AQ96P16 AL359715.3-201ENST00000569267 2123 ntBASIC5.59□□□□□ -1.52
RPRD1AQ96P16 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RPRD1AQ96P16 HCFC2P1-201ENST00000392864 1592 ntBASIC5.59□□□□□ -1.52
RPRD1AQ96P16 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.59□□□□□ -1.52
RPRD1AQ96P16 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
RPRD1AQ96P16 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RPRD1AQ96P16 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RPRD1AQ96P16 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.58□□□□□ -1.52
RPRD1AQ96P16 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RPRD1AQ96P16 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.58□□□□□ -1.52
RPRD1AQ96P16 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RPRD1AQ96P16 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms