Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC104623.2-202ENST00000623477 4002 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 RN7SKP250-201ENST00000363924 321 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 RNA5SP232-201ENST00000364144 119 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 OR13Z1P-201ENST00000416141 834 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 THEM7P-201ENST00000419556 672 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 TAAR4P-201ENST00000454843 1039 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 PSAT1P4-201ENST00000466500 526 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC107015.1-201ENST00000466902 747 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 RPSAP39-201ENST00000467439 883 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC104629.2-201ENST00000468627 598 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AL049874.2-201ENST00000492636 288 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC105384.2-201ENST00000508433 640 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC021193.1-201ENST00000511607 420 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AP003033.2-201ENST00000528901 805 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 OR4A41P-201ENST00000533053 928 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 LSM3P2-201ENST00000551246 273 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 MIR4502-201ENST00000580432 81 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AL139099.4-201ENST00000614802 114 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC019080.5-201ENST00000624891 757 ntBASIC4.97□□□□□ -1.61
RFT1Q96AA3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFT1Q96AA3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RFT1Q96AA3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
RFT1Q96AA3 AC083899.1-201ENST00000454465 3819 ntBASIC4.96□□□□□ -1.61
RFT1Q96AA3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 MIR421-201ENST00000365696 85 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 BMS1P3-201ENST00000372011 932 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 SNORA51.9-201ENST00000384295 124 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 RBBP4P5-201ENST00000398583 1266 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AL096711.1-201ENST00000404780 554 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC096921.1-201ENST00000411661 375 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AL354890.1-201ENST00000413730 346 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 RNF19BPX-201ENST00000426224 625 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 DEFA9P-201ENST00000433042 285 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC007563.3-201ENST00000433233 371 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 NDUFB4P8-201ENST00000435351 367 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AL450263.2-201ENST00000439400 589 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC007383.1-201ENST00000445875 636 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 OR52E3P-201ENST00000452083 936 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC093166.4-201ENST00000457867 318 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC098818.1-201ENST00000478593 252 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 RPL7AP10-201ENST00000481016 791 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 RPS7P6-201ENST00000485777 579 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC108157.1-201ENST00000510511 539 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms