Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 Z82198.3-201ENST00000421145 199 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AL606495.1-201ENST00000422100 813 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 DSTNP5-201ENST00000427921 523 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC023141.3-201ENST00000436698 278 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 RPL12P49-201ENST00000441100 121 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AL606517.1-201ENST00000446914 387 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 HMGB1P7-201ENST00000450921 612 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 RPL23AP23-201ENST00000452590 471 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 MEMO1P4-201ENST00000453590 386 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 RN7SL197P-201ENST00000466981 299 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC099521.1-201ENST00000482557 334 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC008410.1-201ENST00000483777 339 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC105384.2-201ENST00000508433 640 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC121161.1-201ENST00000510606 652 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 PRMT5P1-201ENST00000514351 598 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC034244.2-201ENST00000514668 858 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC104115.2-201ENST00000523026 687 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 GLRXP2-201ENST00000555594 321 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC007346.1-201ENST00000569208 867 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 WBP1LP12-201ENST00000604449 331 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC112503.2-201ENST00000609005 552 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC004241.3-201ENST00000611728 517 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC007786.3-201ENST00000615154 596 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 MIR6133-201ENST00000617057 108 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC008147.4-201ENST00000617570 1204 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AL357140.4-201ENST00000636827 412 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 PSG10P-201ENST00000501199 1500 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC009962.1-201ENST00000567327 3813 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC092111.2-201ENST00000611627 1414 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 HSPD1P9-201ENST00000420325 1636 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC002525.1-201ENST00000624392 1622 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 RN7SKP184-201ENST00000362348 333 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL034417.1-201ENST00000399343 800 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC016739.1-201ENST00000405359 345 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 NACAP7-201ENST00000407371 609 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL035422.1-201ENST00000414193 397 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 NPM1P18-201ENST00000434232 732 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 TUBB4BP6-201ENST00000437576 479 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 BMS1P10-201ENST00000443754 1120 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL096829.2-201ENST00000446582 742 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 RN7SL72P-201ENST00000460697 269 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC108729.1-201ENST00000487812 947 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 HAUS1P1-201ENST00000505275 832 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 OR4A43P-201ENST00000532938 908 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AP001804.2-201ENST00000533932 910 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC092332.1-201ENST00000563684 829 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC106730.2-201ENST00000566641 540 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms