Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.19□□□□□ -1.58
VSX2P58304 AC073869.8-201ENST00000641806 335 ntBASIC5.19□□□□□ -1.58
VSX2P58304 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
VSX2P58304 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.19□□□□□ -1.58
VSX2P58304 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VSX2P58304 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
VSX2P58304 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.18□□□□□ -1.58
VSX2P58304 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VSX2P58304 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.18□□□□□ -1.58
VSX2P58304 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.18□□□□□ -1.58
VSX2P58304 AC092681.1-201ENST00000297369 291 ntBASIC5.18□□□□□ -1.58
VSX2P58304 AL355433.1-201ENST00000422804 300 ntBASIC5.18□□□□□ -1.58
VSX2P58304 DSTNP5-201ENST00000427921 523 ntBASIC5.18□□□□□ -1.58
VSX2P58304 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.18□□□□□ -1.58
VSX2P58304 AL672138.1-201ENST00000450604 1015 ntBASIC5.18□□□□□ -1.58
VSX2P58304 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 RN7SL447P-201ENST00000494711 245 ntBASIC5.18□□□□□ -1.58
VSX2P58304 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.18□□□□□ -1.58
VSX2P58304 HMGB1P40-201ENST00000525121 540 ntBASIC5.18□□□□□ -1.58
VSX2P58304 AP004607.2-201ENST00000533949 322 ntBASIC5.18□□□□□ -1.58
VSX2P58304 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
VSX2P58304 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.18□□□□□ -1.58
VSX2P58304 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.18□□□□□ -1.58
VSX2P58304 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.18□□□□□ -1.58
VSX2P58304 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.18□□□□□ -1.58
VSX2P58304 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.18□□□□□ -1.58
VSX2P58304 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VSX2P58304 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VSX2P58304 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
VSX2P58304 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSX2P58304 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
VSX2P58304 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VSX2P58304 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.18□□□□□ -1.58
VSX2P58304 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.18□□□□□ -1.58
VSX2P58304 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.18□□□□□ -1.58
VSX2P58304 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 AC079097.1-201ENST00000512187 1399 ntBASIC5.17□□□□□ -1.58
VSX2P58304 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VSX2P58304 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VSX2P58304 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VSX2P58304 MIR1286-201ENST00000408112 78 ntBASIC5.17□□□□□ -1.58
VSX2P58304 SNORA11B-201ENST00000408175 129 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AP000534.2-201ENST00000412729 568 ntBASIC5.17□□□□□ -1.58
VSX2P58304 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.17□□□□□ -1.58
VSX2P58304 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.17□□□□□ -1.58
VSX2P58304 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.17□□□□□ -1.58
VSX2P58304 FAM96AP1-201ENST00000430879 482 ntBASIC5.17□□□□□ -1.58
VSX2P58304 RPL12P17-201ENST00000432393 498 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC073465.2-201ENST00000440938 498 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.17□□□□□ -1.58
VSX2P58304 RPS26P41-201ENST00000450370 284 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC110749.1-201ENST00000462007 357 ntBASIC5.17□□□□□ -1.58
VSX2P58304 ABCC13-202ENST00000463099 3842 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC092754.1-201ENST00000472975 479 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 AC105420.1-201ENST00000504389 582 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.17□□□□□ -1.58
VSX2P58304 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.17□□□□□ -1.58
VSX2P58304 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.17□□□□□ -1.58
VSX2P58304 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.17□□□□□ -1.58
VSX2P58304 AC126177.5-201ENST00000549599 178 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 MIR1269B-201ENST00000580405 75 ntBASIC5.17□□□□□ -1.58
VSX2P58304 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.17□□□□□ -1.58
VSX2P58304 SUMO2P15-201ENST00000604285 278 ntBASIC5.17□□□□□ -1.58
VSX2P58304 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 AC008115.4-201ENST00000619780 775 ntBASIC5.17□□□□□ -1.58
VSX2P58304 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.17□□□□□ -1.58
VSX2P58304 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.17□□□□□ -1.58
VSX2P58304 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.17□□□□□ -1.58
VSX2P58304 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VSX2P58304 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.17□□□□□ -1.58
VSX2P58304 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.17□□□□□ -1.58
VSX2P58304 AC099654.3-201ENST00000447087 1546 ntBASIC5.17□□□□□ -1.58
VSX2P58304 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms