Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH4P55283 RARSP1-201ENST00000542842 1418 ntBASIC5.52□□□□□ -1.53
CDH4P55283 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH4P55283 SNORA67-201ENST00000384423 137 ntBASIC5.52□□□□□ -1.53
CDH4P55283 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH4P55283 AL133482.1-201ENST00000415988 498 ntBASIC5.52□□□□□ -1.53
CDH4P55283 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH4P55283 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH4P55283 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH4P55283 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH4P55283 UBA52P7-201ENST00000486088 380 ntBASIC5.52□□□□□ -1.53
CDH4P55283 RN7SL629P-201ENST00000489622 285 ntBASIC5.52□□□□□ -1.53
CDH4P55283 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH4P55283 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 YWHABP2-201ENST00000540201 713 ntBASIC5.52□□□□□ -1.53
CDH4P55283 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH4P55283 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH4P55283 AC116158.1-201ENST00000560231 2129 ntBASIC5.52□□□□□ -1.53
CDH4P55283 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH4P55283 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH4P55283 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 AP003072.5-201ENST00000623872 773 ntBASIC5.52□□□□□ -1.53
CDH4P55283 AC021766.1-201ENST00000624404 741 ntBASIC5.52□□□□□ -1.53
CDH4P55283 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH4P55283 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH4P55283 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH4P55283 AL138820.1-201ENST00000617901 5305 ntBASIC5.52□□□□□ -1.53
CDH4P55283 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH4P55283 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH4P55283 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH4P55283 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH4P55283 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
CDH4P55283 RNU1-149P-201ENST00000390870 161 ntBASIC5.51□□□□□ -1.53
CDH4P55283 HSPA8P15-201ENST00000401676 786 ntBASIC5.51□□□□□ -1.53
CDH4P55283 OR4K12P-201ENST00000406538 961 ntBASIC5.51□□□□□ -1.53
CDH4P55283 SNORA81-201ENST00000408493 178 ntBASIC5.51□□□□□ -1.53
CDH4P55283 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH4P55283 AL158827.1-201ENST00000416300 391 ntBASIC5.51□□□□□ -1.53
CDH4P55283 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH4P55283 AL355433.1-201ENST00000422804 300 ntBASIC5.51□□□□□ -1.53
CDH4P55283 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH4P55283 AC093655.2-201ENST00000425735 631 ntBASIC5.51□□□□□ -1.53
CDH4P55283 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH4P55283 AC023271.1-201ENST00000445936 1090 ntBASIC5.51□□□□□ -1.53
CDH4P55283 MTND6P5-201ENST00000448266 512 ntBASIC5.51□□□□□ -1.53
CDH4P55283 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH4P55283 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
CDH4P55283 RPL7P40-201ENST00000481703 745 ntBASIC5.51□□□□□ -1.53
CDH4P55283 RPS4XP1-201ENST00000482189 787 ntBASIC5.51□□□□□ -1.53
CDH4P55283 RN7SL30P-201ENST00000488416 306 ntBASIC5.51□□□□□ -1.53
CDH4P55283 OR2A3P-201ENST00000493774 953 ntBASIC5.51□□□□□ -1.53
CDH4P55283 RNU6-941P-201ENST00000516346 108 ntBASIC5.51□□□□□ -1.53
CDH4P55283 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
CDH4P55283 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH4P55283 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH4P55283 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH4P55283 RPL10P14-201ENST00000565265 298 ntBASIC5.51□□□□□ -1.53
CDH4P55283 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH4P55283 AC244107.2-201ENST00000611773 76 ntBASIC5.51□□□□□ -1.53
CDH4P55283 MIR6133-201ENST00000617057 108 ntBASIC5.51□□□□□ -1.53
CDH4P55283 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDH4P55283 OR55B1P-203ENST00000641518 2602 ntBASIC5.51□□□□□ -1.53
CDH4P55283 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH4P55283 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH4P55283 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH4P55283 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH4P55283 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CDH4P55283 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH4P55283 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH4P55283 AL353796.1-201ENST00000561542 3241 ntBASIC5.5□□□□□ -1.53
CDH4P55283 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH4P55283 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CDH4P55283 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH4P55283 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH4P55283 MTHFD2P5-201ENST00000320415 844 ntBASIC5.5□□□□□ -1.53
CDH4P55283 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH4P55283 AC108075.1-201ENST00000424692 529 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms