Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.11□□□□□ -1.43
COPAP53621 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 AL158050.2-201ENST00000605336 568 ntBASIC6.11□□□□□ -1.43
COPAP53621 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.11□□□□□ -1.43
COPAP53621 MIR8084-201ENST00000614105 89 ntBASIC6.11□□□□□ -1.43
COPAP53621 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
COPAP53621 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COPAP53621 AC090617.9-201ENST00000623751 147 ntBASIC6.11□□□□□ -1.43
COPAP53621 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 AL606537.1-201ENST00000607258 2011 ntBASIC6.11□□□□□ -1.43
COPAP53621 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.11□□□□□ -1.43
COPAP53621 AC140134.1-201ENST00000511830 3544 ntBASIC6.11□□□□□ -1.43
COPAP53621 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 CASC19-261ENST00000641853 1638 ntBASIC6.1□□□□□ -1.43
COPAP53621 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 MTCO1P4-201ENST00000520516 1409 ntBASIC6.1□□□□□ -1.43
COPAP53621 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.1□□□□□ -1.43
COPAP53621 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 AC027088.4-201ENST00000611559 1947 ntBASIC6.1□□□□□ -1.43
COPAP53621 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COPAP53621 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COPAP53621 RNA5SP375-201ENST00000362975 119 ntBASIC6.1□□□□□ -1.43
COPAP53621 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COPAP53621 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COPAP53621 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 RNA5SP178-201ENST00000410380 128 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.1□□□□□ -1.43
COPAP53621 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.1□□□□□ -1.43
COPAP53621 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.1□□□□□ -1.43
COPAP53621 NENFP1-201ENST00000419476 466 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 AL512661.1-201ENST00000434586 1253 ntBASIC6.1□□□□□ -1.43
COPAP53621 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.1□□□□□ -1.43
COPAP53621 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 HMGN1P36-201ENST00000446623 298 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC093719.1-201ENST00000480427 441 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 AC093815.1-201ENST00000508637 280 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC021146.7-201ENST00000509604 775 ntBASIC6.1□□□□□ -1.43
COPAP53621 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 CYP4F27P-201ENST00000514557 494 ntBASIC6.1□□□□□ -1.43
COPAP53621 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.1□□□□□ -1.43
COPAP53621 OR4A17P-201ENST00000526032 904 ntBASIC6.1□□□□□ -1.43
COPAP53621 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC079600.1-201ENST00000550326 297 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.1□□□□□ -1.43
COPAP53621 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.1□□□□□ -1.43
COPAP53621 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 AC122134.1-201ENST00000565664 1104 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.1□□□□□ -1.43
COPAP53621 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.1□□□□□ -1.43
COPAP53621 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.1□□□□□ -1.43
COPAP53621 COX6CP7-201ENST00000597056 208 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC004890.3-201ENST00000605566 1095 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 FAM72A-208ENST00000607379 1139 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC091046.2-201ENST00000620775 665 ntBASIC6.1□□□□□ -1.43
COPAP53621 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.1□□□□□ -1.43
COPAP53621 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COPAP53621 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.1□□□□□ -1.43
COPAP53621 AC012254.3-201ENST00000591183 2117 ntBASIC6.1□□□□□ -1.43
COPAP53621 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPAP53621 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.09□□□□□ -1.43
COPAP53621 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.09□□□□□ -1.43
COPAP53621 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COPAP53621 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms