Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.41□□□□□ -1.54
PDX1P52945 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDX1P52945 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.41□□□□□ -1.54
PDX1P52945 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 CYCSP6-201ENST00000434498 302 ntBASIC5.41□□□□□ -1.54
PDX1P52945 OR6D1P-201ENST00000436165 939 ntBASIC5.41□□□□□ -1.54
PDX1P52945 RAB9AP5-201ENST00000437794 597 ntBASIC5.41□□□□□ -1.54
PDX1P52945 RAB9AP2-201ENST00000443911 597 ntBASIC5.41□□□□□ -1.54
PDX1P52945 FAR2P1-206ENST00000449736 709 ntBASIC5.41□□□□□ -1.54
PDX1P52945 RPL31P53-201ENST00000457065 348 ntBASIC5.41□□□□□ -1.54
PDX1P52945 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.41□□□□□ -1.54
PDX1P52945 RNU1-88P-201ENST00000459274 128 ntBASIC5.41□□□□□ -1.54
PDX1P52945 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.41□□□□□ -1.54
PDX1P52945 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.41□□□□□ -1.54
PDX1P52945 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.41□□□□□ -1.54
PDX1P52945 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.41□□□□□ -1.54
PDX1P52945 AC126177.5-201ENST00000549599 178 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AL049779.2-201ENST00000553847 315 ntBASIC5.41□□□□□ -1.54
PDX1P52945 MIR3908-201ENST00000579798 126 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AC000068.2-201ENST00000608816 460 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AC093388.1-201ENST00000609166 430 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.41□□□□□ -1.54
PDX1P52945 AL139407.1-201ENST00000613826 1175 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AC090607.5-201ENST00000615692 224 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.41□□□□□ -1.54
PDX1P52945 HPVC1-201ENST00000629899 1198 ntBASIC5.41□□□□□ -1.54
PDX1P52945 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.41□□□□□ -1.54
PDX1P52945 AL163152.1-201ENST00000642001 374 ntBASIC5.41□□□□□ -1.54
PDX1P52945 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PDX1P52945 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.41□□□□□ -1.54
PDX1P52945 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 AC137056.2-201ENST00000624055 1958 ntBASIC5.4□□□□□ -1.54
PDX1P52945 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDX1P52945 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PDX1P52945 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.4□□□□□ -1.54
PDX1P52945 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDX1P52945 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDX1P52945 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDX1P52945 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDX1P52945 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDX1P52945 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 U3.10-201ENST00000364459 214 ntBASIC5.4□□□□□ -1.54
PDX1P52945 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDX1P52945 RNA5SP91-201ENST00000390902 119 ntBASIC5.4□□□□□ -1.54
PDX1P52945 AL390774.1-201ENST00000411924 246 ntBASIC5.4□□□□□ -1.54
PDX1P52945 RPS6P23-201ENST00000413224 722 ntBASIC5.4□□□□□ -1.54
PDX1P52945 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.4□□□□□ -1.54
PDX1P52945 METTL15P3-201ENST00000415522 1221 ntBASIC5.4□□□□□ -1.54
PDX1P52945 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.4□□□□□ -1.54
PDX1P52945 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.4□□□□□ -1.54
PDX1P52945 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.4□□□□□ -1.54
PDX1P52945 RPS27P18-201ENST00000431701 247 ntBASIC5.4□□□□□ -1.54
PDX1P52945 OR52B5P-201ENST00000435337 951 ntBASIC5.4□□□□□ -1.54
PDX1P52945 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.4□□□□□ -1.54
PDX1P52945 AURKAPS1-201ENST00000451805 1212 ntBASIC5.4□□□□□ -1.54
PDX1P52945 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.4□□□□□ -1.54
PDX1P52945 RPL7P39-201ENST00000481157 744 ntBASIC5.4□□□□□ -1.54
PDX1P52945 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.4□□□□□ -1.54
PDX1P52945 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.4□□□□□ -1.54
PDX1P52945 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.4□□□□□ -1.54
PDX1P52945 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
PDX1P52945 AL163952.1-202ENST00000569625 600 ntBASIC5.4□□□□□ -1.54
PDX1P52945 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.4□□□□□ -1.54
PDX1P52945 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.4□□□□□ -1.54
PDX1P52945 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 AL023583.1-201ENST00000607518 1143 ntBASIC5.4□□□□□ -1.54
PDX1P52945 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 AC104307.1-201ENST00000616142 196 ntBASIC5.4□□□□□ -1.54
PDX1P52945 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.4□□□□□ -1.54
PDX1P52945 AC000095.2-202ENST00000637415 154 ntBASIC5.4□□□□□ -1.54
PDX1P52945 OR52B5P-202ENST00000641118 1110 ntBASIC5.4□□□□□ -1.54
PDX1P52945 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDX1P52945 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDX1P52945 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PDX1P52945 AP002512.4-202ENST00000641599 4530 ntBASIC5.4□□□□□ -1.55
PDX1P52945 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.4□□□□□ -1.55
PDX1P52945 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDX1P52945 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PDX1P52945 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms