Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 PCNPP1-201ENST00000552501 511 ntBASIC8.31□□□□□ -1.08
CLIP1P30622 MIR4480-201ENST00000582492 71 ntBASIC8.31□□□□□ -1.08
CLIP1P30622 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.31□□□□□ -1.08
CLIP1P30622 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.31□□□□□ -1.08
CLIP1P30622 AC087385.3-201ENST00000620477 187 ntBASIC8.31□□□□□ -1.08
CLIP1P30622 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CLIP1P30622 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP1P30622 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.31□□□□□ -1.08
CLIP1P30622 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CLIP1P30622 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP1P30622 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CLIP1P30622 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
CLIP1P30622 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.3□□□□□ -1.08
CLIP1P30622 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.3□□□□□ -1.08
CLIP1P30622 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP1P30622 MTND2P40-201ENST00000436718 841 ntBASIC8.3□□□□□ -1.08
CLIP1P30622 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.3□□□□□ -1.08
CLIP1P30622 RN7SL197P-201ENST00000466981 299 ntBASIC8.3□□□□□ -1.08
CLIP1P30622 AC007686.1-201ENST00000488511 463 ntBASIC8.3□□□□□ -1.08
CLIP1P30622 AC097173.1-201ENST00000505862 819 ntBASIC8.3□□□□□ -1.08
CLIP1P30622 AC012400.1-201ENST00000518452 381 ntBASIC8.3□□□□□ -1.08
CLIP1P30622 BRD9P1-201ENST00000529855 560 ntBASIC8.3□□□□□ -1.08
CLIP1P30622 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP1P30622 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC8.3□□□□□ -1.08
CLIP1P30622 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP1P30622 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP1P30622 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
CLIP1P30622 INTS6P1-201ENST00000504674 2530 ntBASIC8.3□□□□□ -1.08
CLIP1P30622 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.3□□□□□ -1.08
CLIP1P30622 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
CLIP1P30622 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP1P30622 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP1P30622 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CLIP1P30622 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP1P30622 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CLIP1P30622 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP1P30622 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP1P30622 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP1P30622 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP1P30622 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP1P30622 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP1P30622 AC104837.2-201ENST00000427236 424 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 TRY2P-201ENST00000448860 689 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.29□□□□□ -1.08
CLIP1P30622 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP1P30622 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CLIP1P30622 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP1P30622 SNX18P3-202ENST00000565670 1750 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP1P30622 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP1P30622 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 CHMP1B2P-201ENST00000399581 597 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC8.29□□□□□ -1.08
CLIP1P30622 AC068138.1-201ENST00000412635 217 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 AL807761.1-201ENST00000417622 171 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP1P30622 AC090018.1-201ENST00000434369 367 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP1P30622 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP1P30622 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP1P30622 KNOP1P3-201ENST00000446933 426 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP1P30622 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP1P30622 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP1P30622 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP1P30622 AL162574.1-201ENST00000615702 950 ntBASIC8.29□□□□□ -1.08
CLIP1P30622 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP1P30622 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CLIP1P30622 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP1P30622 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP1P30622 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP1P30622 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP1P30622 AL591135.1-201ENST00000401578 5914 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
CLIP1P30622 AL035419.1-201ENST00000397037 564 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 BX323845.1-201ENST00000432417 179 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.28□□□□□ -1.08
CLIP1P30622 RPS3AP53-201ENST00000454716 778 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AC092324.1-201ENST00000468671 324 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AC090142.2-201ENST00000483263 416 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AC105233.1-201ENST00000498840 781 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.28□□□□□ -1.08
CLIP1P30622 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.28□□□□□ -1.08
CLIP1P30622 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.28□□□□□ -1.08
CLIP1P30622 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.28□□□□□ -1.08
CLIP1P30622 MIR3934-201ENST00000579806 107 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP1P30622 AC005084.1-201ENST00000605160 304 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AC093799.2-201ENST00000610062 578 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 AC135068.12-201ENST00000637370 931 ntBASIC8.28□□□□□ -1.08
CLIP1P30622 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CLIP1P30622 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CLIP1P30622 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms