Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.72□□□□□ -1.65
USF1P22415 RPSAP73-201ENST00000614820 330 ntBASIC4.72□□□□□ -1.65
USF1P22415 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.72□□□□□ -1.65
USF1P22415 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
USF1P22415 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.72□□□□□ -1.65
USF1P22415 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USF1P22415 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.72□□□□□ -1.65
USF1P22415 FBXL21-201ENST00000297158 1305 ntBASIC4.72□□□□□ -1.65
USF1P22415 AL929601.4-201ENST00000613011 1341 ntBASIC4.72□□□□□ -1.65
USF1P22415 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
USF1P22415 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
USF1P22415 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
USF1P22415 OR9K1P-202ENST00000641111 3217 ntBASIC4.71□□□□□ -1.66
USF1P22415 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.71□□□□□ -1.66
USF1P22415 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.71□□□□□ -1.66
USF1P22415 RNA5SP507-201ENST00000363603 121 ntBASIC4.71□□□□□ -1.66
USF1P22415 RNA5SP234-201ENST00000363916 119 ntBASIC4.71□□□□□ -1.66
USF1P22415 RNA5SP30-201ENST00000365552 115 ntBASIC4.71□□□□□ -1.66
USF1P22415 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.71□□□□□ -1.66
USF1P22415 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
USF1P22415 RPS6P23-201ENST00000413224 722 ntBASIC4.71□□□□□ -1.66
USF1P22415 RPL35AP24-201ENST00000413846 330 ntBASIC4.71□□□□□ -1.66
USF1P22415 CYCSP6-201ENST00000434498 302 ntBASIC4.71□□□□□ -1.66
USF1P22415 CNOT7P2-201ENST00000441051 832 ntBASIC4.71□□□□□ -1.66
USF1P22415 VN1R96P-201ENST00000446052 858 ntBASIC4.71□□□□□ -1.66
USF1P22415 MEMO1P4-201ENST00000453590 386 ntBASIC4.71□□□□□ -1.66
USF1P22415 SEPT7P3-201ENST00000455017 621 ntBASIC4.71□□□□□ -1.66
USF1P22415 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.71□□□□□ -1.66
USF1P22415 AC079841.1-201ENST00000481228 950 ntBASIC4.71□□□□□ -1.66
USF1P22415 RPL15P21-201ENST00000495592 567 ntBASIC4.71□□□□□ -1.66
USF1P22415 AC105384.2-201ENST00000508433 640 ntBASIC4.71□□□□□ -1.66
USF1P22415 GLUD1P3-202ENST00000508551 200 ntBASIC4.71□□□□□ -1.66
USF1P22415 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USF1P22415 OR8Q1P-201ENST00000526467 655 ntBASIC4.71□□□□□ -1.66
USF1P22415 AC084824.2-201ENST00000548906 345 ntBASIC4.71□□□□□ -1.66
USF1P22415 AC126615.2-201ENST00000553003 515 ntBASIC4.71□□□□□ -1.66
USF1P22415 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.71□□□□□ -1.66
USF1P22415 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.71□□□□□ -1.66
USF1P22415 AC010503.3-201ENST00000594355 540 ntBASIC4.71□□□□□ -1.66
USF1P22415 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.71□□□□□ -1.66
USF1P22415 AC136428.4-201ENST00000634254 1155 ntBASIC4.71□□□□□ -1.66
USF1P22415 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USF1P22415 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
USF1P22415 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USF1P22415 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
USF1P22415 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
USF1P22415 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USF1P22415 AC144833.1-201ENST00000567953 4089 ntBASIC4.7□□□□□ -1.66
USF1P22415 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USF1P22415 AC083843.2-201ENST00000568248 6253 ntBASIC4.7□□□□□ -1.66
USF1P22415 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USF1P22415 Z95331.1-201ENST00000623075 23112 ntBASIC4.7□□□□□ -1.66
USF1P22415 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USF1P22415 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
USF1P22415 MIR551A-201ENST00000385042 96 ntBASIC4.7□□□□□ -1.66
USF1P22415 AC007068.1-201ENST00000396690 844 ntBASIC4.7□□□□□ -1.66
USF1P22415 NENFP1-201ENST00000419476 466 ntBASIC4.7□□□□□ -1.66
USF1P22415 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.7□□□□□ -1.66
USF1P22415 RNGTTP1-201ENST00000420965 728 ntBASIC4.7□□□□□ -1.66
USF1P22415 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USF1P22415 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.7□□□□□ -1.66
USF1P22415 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.7□□□□□ -1.66
USF1P22415 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.7□□□□□ -1.66
USF1P22415 AC019185.1-201ENST00000442718 389 ntBASIC4.7□□□□□ -1.66
USF1P22415 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.7□□□□□ -1.66
USF1P22415 EEF1B2P5-201ENST00000444820 548 ntBASIC4.7□□□□□ -1.66
USF1P22415 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.7□□□□□ -1.66
USF1P22415 VDAC2P4-201ENST00000452925 711 ntBASIC4.7□□□□□ -1.66
USF1P22415 AC005532.2-201ENST00000467154 373 ntBASIC4.7□□□□□ -1.66
USF1P22415 RN7SL329P-201ENST00000467740 299 ntBASIC4.7□□□□□ -1.66
USF1P22415 RPS4XP1-201ENST00000482189 787 ntBASIC4.7□□□□□ -1.66
USF1P22415 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.7□□□□□ -1.66
USF1P22415 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.7□□□□□ -1.66
USF1P22415 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.7□□□□□ -1.66
USF1P22415 AP006245.2-201ENST00000522004 300 ntBASIC4.7□□□□□ -1.66
USF1P22415 HMGN2P6-201ENST00000551091 273 ntBASIC4.7□□□□□ -1.66
USF1P22415 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.7□□□□□ -1.66
USF1P22415 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.7□□□□□ -1.66
USF1P22415 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.7□□□□□ -1.66
USF1P22415 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.7□□□□□ -1.66
USF1P22415 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USF1P22415 AC099654.6-201ENST00000636487 512 ntBASIC4.7□□□□□ -1.66
USF1P22415 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms