Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 NAP1L4P2-201ENST00000425958 899 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 RPL7P56-201ENST00000429441 717 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 SUMO2P3-201ENST00000438311 288 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC064862.4-201ENST00000442180 334 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC023271.1-201ENST00000445936 1090 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AL450023.1-201ENST00000450868 751 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 VDAC2P4-201ENST00000452925 711 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AP000547.1-201ENST00000454360 617 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AZGP1P2-201ENST00000454506 345 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 LDHBP2-201ENST00000456969 1005 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC138866.2-201ENST00000508650 584 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 EIF1AXP2-201ENST00000555940 413 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 MRPS21P7-201ENST00000566937 238 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 RBM22P12-201ENST00000567098 1255 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC126175.1-201ENST00000617041 758 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC026523.2-201ENST00000625039 7739 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC079097.1-201ENST00000512187 1399 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC144833.1-201ENST00000567953 4089 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC007938.2-201ENST00000604666 2634 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 RN7SKP269-201ENST00000365545 319 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC092642.1-201ENST00000392417 425 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AL596448.1-201ENST00000415024 392 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC093084.1-201ENST00000424233 687 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 HMGB1P32-201ENST00000425971 565 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC002504.1-201ENST00000438281 691 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AL391987.1-201ENST00000441025 200 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 EEF1B2P6-201ENST00000445713 673 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 RN7SL583P-201ENST00000475692 287 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC008147.3-201ENST00000548666 354 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC012146.2-201ENST00000576545 416 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC008115.3-201ENST00000614874 549 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 CU639417.4-201ENST00000623928 207 ntBASIC5.59□□□□□ -1.51
HLA-DPA1P20036 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DPA1P20036 AC018809.2-201ENST00000602436 3823 ntBASIC5.59□□□□□ -1.52
HLA-DPA1P20036 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms